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Related Concept Videos

Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

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A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
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Genome-wide Association Studies-GWAS01:11

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Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
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Targets for Drug Action: Overview01:26

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Drugs target macromolecules to modify ongoing cellular processes. Primary drug targets include receptors, ion channels, transporters, and enzymes.
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Human Genetics01:28

Human Genetics

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Human genetics provides a profound framework for understanding the interplay between genetic predispositions and human psychology. At the heart of this discipline lies the study of how genes influence physical traits, behaviors, and susceptibility to diseases. Each person carries a unique genetic code that subtly or significantly shapes their psychological and behavioral landscape.
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Comparing Copy Number Variations and SNPs02:26

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Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
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Factors Affecting Drug Response: Overview01:21

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When it comes to infants and young children, they are typically administered smaller doses of medication in comparison to adults. This is primarily because their organ functions still need to fully develop, meaning their bodies are not as efficient at metabolizing or eliminating drugs. Additionally, their blood-brain barrier is more permeable than in adults. As a result, high concentrations of drugs can easily penetrate the central nervous system (CNS), potentially leading to neurological...
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Updated: Dec 19, 2025

Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA
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Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA

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Pharmacogenomics: Current Actionable Variants.

Vanessa González-Covarrubias1, Karla Lozano2, Tomas Texis2

  • 1Instituto Nacional de Medicina Genómica, SSA, Mexico City, Mexico.

Revista De Investigacion Clinica; Organo Del Hospital De Enfermedades De La Nutricion
|June 4, 2020
PubMed
Summary

Pharmacogenomics (PGx) uses genetic information to guide drug selection and dosing for better patient outcomes. This study reviews actionable PGx gene-drug pairs and highlights knowledge gaps in Mexican populations.

Keywords:
Pharmacogenomics.Drug efficacyPharmacokineticsPharmacodynamicsMestizosNatives

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Area of Science:

  • Pharmacogenomics
  • Precision Medicine
  • Clinical Pharmacology

Background:

  • Pharmacogenomics (PGx) is a key component of precision medicine, slowly integrating into clinical practice.
  • PGx implementation involves genotype-phenotype associations, validation studies, and data mining by consortia.
  • Over 200 drug-gene pairs are classified, informing clinical guidelines and FDA drug recommendations.

Purpose of the Study:

  • To outline the process of PGx implementation and guideline development.
  • To list current actionable drug-gene pairs.
  • To assess the status of PGx knowledge in Mexican populations for specific gene-drug pairs.

Main Methods:

  • Literature review of PGx research and guidelines.
  • Analysis of actionable drug-gene pairs and their documentation.
  • Collection of allele frequency data for actionable variants in Mexican populations.

Main Results:

  • Discussion of the steps involved in PGx guideline creation.
  • Identification of 19 key genes and 47 drugs with actionable PGx variants.
  • Compilation of allele frequency data and identification of PGx information gaps in Native and Mestizo populations.

Conclusions:

  • PGx implementation is a multi-step process culminating in clinical guidelines.
  • There are significant gaps in PGx knowledge for Mexican populations, particularly for Native and Mestizo groups.
  • Further research is crucial to expand PGx utility in diverse populations.