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Published on: April 9, 2017
MusiJ: an ImageJ plugin for video nanoscopy
Sebastian Acuña1,2, Florian Ströhl1,2, Ida S Opstad1
1Department of Physics and Technology, UiT The Arctic University of Norway, NO-9037 Tromsø, Norway.
Abstract:
We present an open-source implementation of the fluctuation-based nanoscopy method MUSICAL for ImageJ. This implementation improves the algorithm's computational efficiency and takes advantage of multi-threading to provide orders of magnitude faster reconstructions than the original MATLAB implementation. In addition, the plugin is capable of generating super-resolution videos from large stacks of time-lapse images via an interleaved reconstruction, thus enabling easy-to-use multi-color super-resolution imaging of dynamic systems.
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