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A Multicenter Preclinical MRI Study: Definition of Rat Brain Relaxometry Reference Maps
Tristan Deruelle1, Frank Kober2, Adriana Perles-Barbacaru2
1INSERM, U1216, Grenoble Institut des Neurosciences, Université Grenoble Alpes, Grenoble, France.
Frontiers in Neuroinformatics
|June 9, 2020
Summary
This study demonstrates the feasibility of multicenter animal imaging by sharing data and processing pipelines. It establishes reproducible T1 and T2 brain mapping in rats, crucial for future pathology research.
Area of Science:
- Neuroimaging
- Veterinary Medicine
- Biomedical Engineering
Background:
- Multicenter studies enhance statistical power in human and animal imaging.
- Standardization is crucial for pooling animal imaging data across institutions.
- Animal models are vital for understanding human diseases.
Purpose of the Study:
- To demonstrate the feasibility of a multicenter animal imaging study.
- To establish reproducible T1 and T2 mapping of the healthy rat brain at 7 Tesla.
- To quantify variability from data acquisition and processing in multicenter settings.
Main Methods:
- Forty rats' raw data and processing pipelines were shared across four imaging centers.
- T1 and T2 mapping of the rat brain at 7T was performed.
- Variability was assessed across two MR data providers and three fitting algorithms.
- Multi-atlas segmentation was conducted on two platforms.
Main Results:
- Differences between data providers were 2.21% for T1 and 9.52% for T2.
- Differences between processing pipelines were 1.04% for T1 and 3.33% for T2.
- The study quantified variability in relaxation time measurements.
Conclusions:
- Multicenter animal imaging is feasible, enabling robust statistical analysis.
- Standardized T1 and T2 maps of the healthy rat brain can be generated.
- These reference maps are valuable for future studies on animal models of pathology.

