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Updated: Dec 19, 2025

CD Spectroscopy to Study DNA-Protein Interactions
Published on: February 10, 2022
Differential functions of FANCI and FANCD2 ubiquitination stabilize ID2 complex on DNA
Martin L Rennie1, Kimon Lemonidis1, Connor Arkinson1
1Institute of Molecular Cell and Systems Biology, College of Medical Veterinary and Life Sciences, University of Glasgow, Glasgow, UK.
Abstract:
The Fanconi anaemia (FA) pathway is a dedicated pathway for the repair of DNA interstrand crosslinks and is additionally activated in response to other forms of replication stress. A key step in the FA pathway is the monoubiquitination of each of the two subunits (FANCI and FANCD2) of the ID2 complex on specific lysine residues. However, the molecular function of these modifications has been unknown for nearly two decades. Here, we find that ubiquitination of FANCD2 acts to increase ID2's affinity for double-stranded DNA via promoting a large-scale conformational change in the complex. The resulting complex encircles DNA, by forming a secondary "Arm" ID2 interface. Ubiquitination of FANCI, on the other hand, largely protects the ubiquitin on FANCD2 from USP1-UAF1 deubiquitination, with key hydrophobic residues of FANCI's ubiquitin being important for this protection. In effect, both of these post-translational modifications function to stabilize a conformation in which the ID2 complex encircles DNA.
Insights
Ubiquitination of FANCD2 and FANCI in the Fanconi anaemia pathway stabilizes the ID2 complex to encircle DNA. This crucial step enhances DNA repair and replication stress response mechanisms.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- The Fanconi anaemia (FA) pathway is essential for repairing DNA interstrand crosslinks.
- This pathway also responds to other replication stress signals.
- Monoubiquitination of the ID2 complex (FANCI-FANCD2) is a key FA pathway step with unknown function.
Purpose of the Study:
- To elucidate the molecular function of FANCI and FANCD2 monoubiquitination.
- To understand how these modifications impact the ID2 complex's role in DNA repair.
Main Methods:
- Biochemical assays to study protein interactions and DNA binding.
- Structural analysis to observe conformational changes in the ID2 complex.
- Site-directed mutagenesis to investigate the role of specific residues.
Main Results:
- FANCD2 ubiquitination increases the ID2 complex's affinity for double-stranded DNA.
- This modification induces a large conformational change, enabling the complex to encircle DNA via a new interface.
- FANCI ubiquitination protects FANCD2-ubiquitin from deubiquitination by USP1-UAF1.
Conclusions:
- Both FANCI and FANCD2 ubiquitination stabilize a DNA-encircling conformation of the ID2 complex.
- These post-translational modifications are critical for the FA pathway's function in DNA repair and replication stress response.
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