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Updated: Dec 18, 2025

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High-resolution Functional Magnetic Resonance Imaging Methods for Human Midbrain
Published on: May 10, 2012
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Intrascanner Reproducibility of an SPM-based Head MR-based Attenuation Correction Method
David Izquierdo-Garcia1, Mark C Eldaief1, Mark G Vangel1
1Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital / Harvard Medical School, Bld. 149, 13 St. Room 1106, Charlestown, MA 02129.
Summary
This study confirms the high repeatability of the SPM-based pseudo-CT approach for brain MR-based attenuation correction (AC) in PET/MRI scans. The method demonstrates robust performance, making it suitable for clinical applications.
Area of Science:
- Medical Imaging
- Nuclear Medicine
- Radiology
Background:
- Current MR-based attenuation correction (AC) methods show comparable accuracy to CT-based AC.
- Robustness, specifically intrascanner reproducibility, is a critical metric for clinical applicability but often unquantified.
- The SPM-based pseudo-CT approach is a promising MR-based AC method for brain PET/MRI.
Purpose of the Study:
- To evaluate the intrascanner reproducibility (repeatability) of the SPM-based pseudo-CT approach for brain MR-based attenuation correction.
- To quantify the robustness of this MR-AC method using established statistical metrics.
Main Methods:
- Retrospective analysis of 22 subjects with 3 serial 18F-FDG PET/MRI visits within 2 months.
- Generation of pseudo-CT mu-maps from MR images for each visit.
- Reconstruction of PET data using mu-maps from all three visits.
- Assessment of repeatability using relative changes (RC), Intraclass Correlation Coefficient (ICC), Reproducibility Coefficient (RDC95%), and Bland-Altman Limits of Agreement (LoA).
Main Results:
- Absolute relative changes in reconstructed PET images were within ~2%.
- Brain cortex and cerebellum showed the largest variability at ~3%.
- Differences in reconstructed PET images across visits were not statistically significant (p=0.90).
Conclusions:
- This study provides the first assessment of the repeatability of the SPM-based pseudo-CT approach for brain MR-AC.
- The method demonstrates excellent repeatability and robustness, alongside previously shown quality and ease of implementation.
- The SPM-based pseudo-CT approach is well-suited for routine brain PET/MRI research and clinical studies.

