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Updated: Dec 18, 2025

Study of Protein-protein Interactions in Autophagy Research
Published on: September 9, 2017
PKD2/polycystin-2 induces autophagy by forming a complex with BECN1
Daniel Peña-Oyarzun1,2, Marcelo Rodriguez-Peña1,2, Francesca Burgos-Bravo3
1Instituto de Investigación en Ciencias Odontológicas (ICOD), Facultad de Odontología, Universidad de Chile, Santiago, Chile.
Abstract:
Macroautophagy/autophagy is an intracellular process involved in the breakdown of macromolecules and organelles. Recent studies have shown that PKD2/PC2/TRPP2 (polycystin 2, transient receptor potential cation channel), a nonselective cation channel permeable to Ca2+ that belongs to the family of transient receptor potential channels, is required for autophagy in multiple cell types by a mechanism that remains unclear. Here, we report that PKD2 forms a protein complex with BECN1 (beclin 1), a key protein required for the formation of autophagic vacuoles, by acting as a scaffold that interacts with several co-modulators via its coiled-coil domain (CCD). Our data identified a physical and functional interaction between PKD2 and BECN1, which depends on one out of two CCD domains (CC1), located in the carboxy-terminal tail of PKD2. In addition, depletion of intracellular Ca2+ with BAPTA-AM not only blunted starvation-induced autophagy but also disrupted the PKD2-BECN1 complex. Consistently, PKD2 overexpression triggered autophagy by increasing its interaction with BECN1, while overexpression of PKD2D509V, a Ca2+ channel activity-deficient mutant, did not induce autophagy and manifested diminished interaction with BECN1. Our findings show that the PKD2-BECN1 complex is required for the induction of autophagy, and its formation depends on the presence of the CC1 domain of PKD2 and on intracellular Ca2+ mobilization by PKD2. These results provide new insights regarding the molecular mechanisms by which PKD2 controls autophagy.Abbreviations: ADPKD: autosomal dominant polycystic kidney disease; ATG: autophagy-related; ATG14/ATG14L: autophagy related 14; Baf A1: bafilomycin A1; BCL2/Bcl-2: BCL2 apoptosis regulator; BCL2L1/BCL-XL: BCL2 like 1; BECN1: beclin 1; CCD: coiled-coil domain; EBSS: Earle's balanced salt solution; ER: endoplasmic reticulum; GAPDH: glyceraldehyde-3-phosphate dehydrogenase; GFP: green fluorescent protein; GOLGA2/GM130: golgin A2; GST: glutathione s-transferase; LAMP1: lysosomal associated membrane protein 1; MAP1LC3/LC3: microtubule associated protein 1 light chain 3; MTORC1: mechanistic target of rapamycin kinase complex 1; NBR1: NBR1 autophagy cargo receptor; PIK3C3/VPS34: phosphatidylinositol 3-kinase catalytic subunit type 3; PKD2/PC2: polycystin 2, transient receptor potential cation channel; RTN4/NOGO: reticulon 4; RUBCN/RUBICON: rubicon autophagy regulator; SQSTM1/p62: sequestosome 1; UVRAG: UV radiation resistance associated; WIPI2: WD repeat domain, phosphoinositide interacting 2.
Insights
Polycystin 2 (PKD2) interacts with beclin 1 (BECN1) to regulate autophagy, a cellular degradation process. This interaction requires PKD2
Area of Science:
- Cell Biology
- Molecular Biology
- Autophagy Research
Background:
- Macroautophagy/autophagy is a fundamental cellular process for degrading macromolecules and organelles.
- Polycystin 2 (PKD2/PC2/TRPP2), a cation channel, is known to be essential for autophagy, but the underlying mechanism is unclear.
- Understanding the molecular players and interactions governing autophagy is crucial for cellular health and disease research.
Purpose of the Study:
- To elucidate the molecular mechanism by which PKD2 regulates autophagy.
- To identify the specific interaction between PKD2 and key autophagy proteins.
- To determine the role of calcium (Ca2+) and PKD2's structural domains in autophagy regulation.
Main Methods:
- Investigated the physical and functional interaction between PKD2 and beclin 1 (BECN1) using co-immunoprecipitation and functional assays.
- Utilized BAPTA-AM to deplete intracellular Ca2+ and assess its impact on autophagy and the PKD2-BECN1 complex.
- Employed overexpression of wild-type PKD2 and a Ca2+ channel-deficient mutant (PKD2D509V) to study their effects on autophagy induction and BECN1 interaction.
Main Results:
- PKD2 forms a direct physical and functional complex with BECN1, a crucial protein for autophagosome formation.
- This interaction is mediated by the coiled-coil domain (CCD) of PKD2 (specifically CC1) and depends on intracellular Ca2+ levels.
- PKD2 overexpression enhances autophagy and BECN1 interaction, while a non-functional PKD2 mutant fails to induce autophagy or interact with BECN1.
Conclusions:
- The formation of the PKD2-BECN1 complex is essential for the induction of autophagy.
- Intracellular Ca2+ mobilization by PKD2 and the integrity of its CC1 domain are critical for this interaction and subsequent autophagy.
- These findings reveal a novel mechanism for PKD2-mediated autophagy regulation, highlighting the importance of the PKD2-BECN1 complex and calcium signaling.
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