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Drug Repurposing Hypothesis Generation Using the "RE:fine Drugs" System
Published on: December 11, 2016
Understanding Drug Repurposing From the Perspective of Biomedical Entities and Their Evolution: Bibliographic
Xin Li1,2, Justin F Rousseau3, Ying Ding4
1Information Retrieval and Knowledge Mining Laboratory, School of Information Management, Wuhan University, Wuhan, China.
Entitymetrics, bibliometric indicators for biomedical entities, reveal drug repurposing (DR) patterns. These metrics help understand knowledge evolution and drive decision-making in drug discovery.
Area of Science:
- Biomedical Informatics
- Pharmacology
- Bibliometrics
Background:
- Drug development is costly and time-consuming with low success rates.
- Drug repurposing (DR) offers advantages in development time, cost, and safety.
- Entitymetrics, bibliometric indicators of biomedical entities, measure knowledge evolution in drug research.
Purpose of the Study:
- To understand drug repurposing (DR) through the lens of biomedical entities (diseases, drugs, genes) and their evolution.
- To investigate the driving factors behind DR at the entity level.
Main Methods:
- Extended bibliometric indicators (entitymetrics) from PubMed to identify patterns in drug research phases.
- Proposed four entitymetric measures: Popularity Index (P1), Promising Index (P2), Prestige Index (P3), and Collaboration Index (CI).
- Utilized aspirin (acetylsalicylic acid) as a case study for repurposing analysis.
Main Results:
- The maxima of P1, P3, and CI correlate with different aspirin repurposing phases.
- Entitymetrics revealed interactions between biomedical entities and drugs during DR.
- P1 and CI track long-term trends, P2 detects immediate changes, and P3 indicates early practical value and research frontiers.
Conclusions:
- Key drivers for DR include in-depth studies of side effects/mechanisms, market competition, and advanced life science technologies.
- Entitymetrics provide a valuable approach for examining DR evolution.
- This methodology can enhance decision-making in drug discovery and development.
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