Hepatitis B virus American genotypes: Pathogenic variants ?

Flor Pujol1, Rossana C Jaspe1, Carmen L Loureiro1

  • 1Laboratorio de Virología Molecular, CMBC, IVIC, Apdo 20632, Caracas 1020A, Venezuela.

Insights

Hepatitis B virus (HBV) genotypes F and H are common in the Americas. Some HBV genotype F subgenotypes, like F1b and F2, may lead to faster liver disease progression and hepatocellular carcinoma (HCC) compared to genotype H.

Area of Science:

  • Hepatology and Virology
  • Genetic Epidemiology
  • Viral Hepatitis Research

Background:

  • Chronic Hepatitis B virus (HBV) infection causes nearly 900,000 deaths annually from cirrhosis and hepatocellular carcinoma (HCC).
  • Ten HBV genotypes (A-J) exist, with genotypes F and H prevalent in the Americas.
  • Genotype frequencies correlate with the genetic admixture of American populations, particularly Amerindian ancestry.

Purpose of the Study:

  • To review the diversity and frequency of HBV variants in the Americas.
  • To evaluate the association between American HBV genotypes/subgenotypes and severe disease progression, including HCC.
  • To investigate potential differences in viral mechanisms, such as basal core promoter mutations, contributing to disease severity.

Main Methods:

  • Review of existing literature on HBV genotypes and subgenotypes in the Americas.
  • Analysis of epidemiological data correlating genotype distribution with population genetic admixture.
  • Examination of studies investigating viral factors (e.g., mutations) and their association with disease outcomes like HCC.

Main Results:

  • HBV genotypes F and H are the primary autochthonous variants in the Americas, with frequencies linked to Amerindian genetic admixture.
  • While methylation patterns showed no significant differences, basal core promoter mutations may be more prevalent in HBV subgenotypes F1b and F2.
  • Subgenotypes F1b and F2 appear associated with more severe liver disease progression, potentially leading to HCC, unlike subgenotype F4 and genotype H.

Conclusions:

  • Not all American HBV variants exhibit a uniform association with rapid HCC progression.
  • HBV subgenotypes F1b and F2 represent a higher risk for severe liver disease compared to F4 and genotype H.
  • Further research is needed to fully elucidate the pathogenic mechanisms and clinical implications of different American HBV genotypes and subgenotypes.

Related Concept Videos

Retroviruses02:33

Retroviruses

Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
14.4K
Blood Types02:20

Blood Types

Human blood is classified into different types based on the presence of antigens on the red blood cell's surface and antibodies in the plasma. Proper identification of blood type is essential for successful blood transfusion. The International Society of Blood Transfusion has identified 38 human blood types based on the surface antigens on the red blood cells. The most common types are ABO, Rh, and MNS blood types.
ABO blood group
ABO antigens are glycoproteins encoded by genes present on...
22.0K
Viruses with RNA Genomes01:29

Viruses with RNA Genomes

RNA viruses are categorized into positive-strand, negative-strand, or double-stranded groups based on their genomic structure and replication mechanisms. This classification dictates how they exploit host cellular machinery for protein synthesis and replication. Some RNA viruses also utilize reverse transcription as part of their life cycle, further diversifying their replication strategies.Positive-Strand RNA VirusesPositive-strand RNA viruses have genomes that function directly as messenger...
573
Subviral Agents01:29

Subviral Agents

Subviral agents are infectious entities that resemble viruses but lack one or more viral components, such as a capsid or essential replication machinery. These agents include viroids, prions, and satellites, each possessing distinct structural and functional characteristics that influence their mode of infection and replication.Viroids are the simplest subviral agents, consisting of circular, single-stranded RNA molecules without a protein coat. They exclusively infect plants, relying entirely...
373
Genome-wide Association Studies-GWAS01:11

Genome-wide Association Studies-GWAS

Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
15.1K
Viral Mutations00:36

Viral Mutations

A mutation is a change in the sequence of bases of DNA or RNA in a genome. Some mutations occur during replication of the genome due to errors made by the polymerase enzymes that replicate DNA or RNA. Unlike DNA polymerase, RNA polymerase is prone to errors because it is not capable of “proofreading” its work. Viruses with RNA-based genomes, like HIV, therefore accrue mutations faster than viruses with DNA-based genomes. Because mutation and recombination provide the raw material...
39.4K