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Updated: Dec 18, 2025

Applying Cheminformatics to Develop a Structure Searchable Database of Analytical Methods
Published on: June 6, 2025
An integrated chemical environment with tools for chemical safety testing
Shannon Bell1, Jaleh Abedini1, Patricia Ceger1
1Integrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA.
The Integrated Chemical Environment (ICE) now offers better access to in vitro data and tools for predicting chemical safety, supporting a move away from animal testing. These updates enhance data reliability for developing new, non-animal safety assessment approaches.
Area of Science:
- Toxicology and Chemical Safety Assessment
- Computational Toxicology
- In Silico Modeling
Background:
- Developing reliable, non-animal testing methods for chemical safety assessment is crucial.
- Existing data accessibility and interpretability can hinder the development of new approach methodologies (NAMs).
- The Integrated Chemical Environment (ICE) is a platform designed to support chemical safety assessments.
Purpose of the Study:
- To describe recent updates to the Integrated Chemical Environment (ICE) platform.
- To enhance the accessibility and interpretability of in vitro data for regulatory applications.
- To improve tools for in vitro to in vivo extrapolation (IVIVE) to build confidence in non-animal approaches.
Main Methods:
- Mechanistic target mapping of in vitro assay data using literature-based mode-of-action information and controlled terminology.
- Curation of Tox21 high-throughput screening data with analytical chemistry data and assay-specific parameters.
- Prediction of physicochemical/ADME parameters for over 800,000 chemicals using quantitative structure-activity relationship (QSAR) models.
- Integration of ICE with the U.S. Environmental Protection Agency's httk R package for IVIVE calculations.
Main Results:
- Improved accessibility and interpretability of in vitro data through mechanistic target mapping.
- Curated Tox21 data with artifact elimination for enhanced reliability.
- Physicochemical/ADME parameters for over 800,000 chemicals generated via QSAR.
- A new ICE IVIVE tool enabling estimation of in vivo exposures from in vitro data.
Conclusions:
- The updated ICE platform provides enhanced data and tools to support species-relevant chemical safety assessments.
- These advancements facilitate the exploration of non-animal approaches and build confidence in their regulatory acceptance.
- Improved data interoperability and IVIVE capabilities are key to advancing the use of NAMs in chemical safety.
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