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Updated: Dec 17, 2025

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Published on: July 20, 2022
Pterocarpan synthase (PTS) structures suggest a common quinone methide-stabilizing function in dirigent proteins and
Qingyan Meng1, Syed G A Moinuddin1, Sung-Jin Kim1
1Institute of Biological Chemistry, Washington State University, Pullman, Washington, USA.
Dirigent proteins (DPs) form complex plant phenolics. We determined the 3D structures of two DPs, revealing their roles in pterocarpan biosynthesis and suggesting a common mechanism for DP evolution.
Area of Science:
- Biochemistry and Molecular Biology
- Plant Science and Evolution
Background:
- Dirigent proteins (DPs) are crucial for synthesizing diverse plant phenolics, with many families awaiting functional characterization.
- DPs emerged during the plant aquatic-to-land transition, indicating their evolutionary significance.
Purpose of the Study:
- To elucidate the 3D structures of two pterocarpan-forming proteins with dirigent-like domains.
- To understand the biochemical mechanisms underlying DP function and their evolutionary diversification.
Main Methods:
- Determined the 3D structures of two pterocarpan-forming proteins.
- Analyzed stereospecific conversion of isoflavonoid precursors to pterocarpans.
- Compared structures with DP orthologs involved in lignan and aromatic terpenoid synthesis.
Main Results:
- Elucidated the 3D structures of two proteins catalyzing stereospecific conversion of precursors to (-)- and (+)-medicarpin.
- Identified a common biochemical mechanism involving stabilization of quinone methide intermediates across different DP families.
- Provided structural basis for DP functional diversification during land plant evolution.
Conclusions:
- The findings offer key insights into the evolutionary appearance and diversification of DPs.
- Proposed biochemical mechanisms provide a framework for identifying novel physiological roles of DPs and related proteins.
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