The Basis for Natural Multiresistance to Phage in Pseudomonas aeruginosa

Christine Pourcel1, Cédric Midoux1, Gilles Vergnaud1

  • 1Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, 91198 Gif-sur-Yvette, France.

Insights

Multiphage-resistant Pseudomonas aeruginosa strains exhibit defects in lipopolysaccharide (LPS) biosynthesis and motility. These resistant strains possess unique genomic features and selective advantages, offering insights into alternative therapeutic strategies beyond antibiotics.

Area of Science:

  • Microbiology
  • Genomics
  • Bacteriology

Background:

  • Pseudomonas aeruginosa causes persistent infections and is challenging to treat, especially within biofilms.
  • Phage therapy is a potential alternative to antibiotics, but some clinical strains exhibit resistance to multiple phages.

Purpose of the Study:

  • To characterize phage-resistant Pseudomonas aeruginosa clinical strains and compare them with susceptible strains.
  • To understand the genetic and phenotypic basis of multi-phage resistance in P. aeruginosa.

Main Methods:

  • Phenotypic characterization of phage-resistant and susceptible P. aeruginosa strains.
  • Whole-genome sequencing of three phage-resistant strains.
  • Analysis of mutations in genes related to lipopolysaccharide (LPS) and type IV pilus synthesis.

Main Results:

  • Phage-resistant strains showed defects in LPS biosynthesis, were nonmotile, and exhibited high autolysis.
  • Genome sequencing revealed accessory genomes with insertion elements, genomic islands, pyocins, and prophages, including those performing lateral transduction.
  • Mutations were identified in genes crucial for LPS and/or type IV pilus synthesis, the primary phage receptors.
  • CRISPR-Cas systems were absent or inactive in resistant strains, indicating they do not confer resistance to lytic phages.

Conclusions:

  • Multiphage-resistant P. aeruginosa strains possess distinct genetic profiles and phenotypic traits, including LPS defects and altered motility.
  • These resistant strains exhibit selective advantages, utilizing mechanisms like pyocin production to eliminate competing bacteria.
  • Understanding these resistance mechanisms is crucial for developing effective phage therapy strategies against P. aeruginosa infections.

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