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Updated: Dec 17, 2025

Simultaneous Multicolor Imaging of Biological Structures with Fluorescence Photoactivation Localization Microscopy
Published on: December 9, 2013
Homogeneous multifocal excitation for high-throughput super-resolution imaging
Dora Mahecic1,2, Davide Gambarotto3, Kyle M Douglass4
1Laboratory for Experimental Biophysics, Institute of Physics, Swiss Federal Institute of Technology Lausanne (EPFL), Lausanne, Switzerland. dora.mahecic@epfl.ch.
Super-resolution microscopy now offers faster, larger field-of-view imaging. Multifocal flat illumination for field-independent imaging (mfFIFI) integrated into instant structured illumination microscopy (iSIM) achieves this for quantitative biology.
Area of Science:
- Biological imaging
- Microscopy techniques
- Quantitative biology
Background:
- Super-resolution microscopy is crucial for biological research.
- Low imaging throughput limits large dataset acquisition for quantitative biology.
Purpose of the Study:
- To enhance imaging throughput and field of view in super-resolution microscopy.
- To enable high-speed, multicolor, volumetric imaging for quantitative biological studies.
Main Methods:
- Integration of multifocal flat illumination for field-independent imaging (mfFIFI) into instant structured illumination microscopy (iSIM).
- Image stitching for extended field of view.
- Combination with expansion microscopy for ultrastructural imaging.
Main Results:
- Achieved >100 × 100 µm² field of view with iSIM, maintaining high-speed, multicolor, volumetric imaging at double the diffraction limit.
- Enabled fast live-cell super-resolution imaging of dozens of cells via image stitching.
- Acquired 3D images of thousands of centrioles per hour with ~35 nm resolution using iSIM and expansion microscopy.
Conclusions:
- Multifocal flat illumination for field-independent imaging (mfFIFI) significantly improves super-resolution microscopy throughput and field of view.
- The developed method allows for large-scale 3D mapping of centriolar structures and modifications.
- This advancement facilitates quantitative analysis of cellular components in large biological datasets.
Related Concept Videos
Super-resolution Fluorescence Microscopy
Confocal Fluorescence Microscopy

