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Deep learning for 'artefact' removal in infrared spectroscopy.
Shuxia Guo1, Thomas Mayerhöfer, Susanne Pahlow
1Leibniz Institute of Photonic Technology Jena (IPHT Jena), Member of Leibniz Health Technologies, 07745 Jena, Germany. thomas.bocklitz@uni-jena.de.
A deep convolutional neural network (CNN) effectively removes optical artefacts from infrared spectra, enabling accurate molecular analysis of complex samples. This method enhances data interpretation by recovering pure absorbance, even when signals are obscured.
Area of Science:
- Spectroscopy
- Data Science
- Materials Science
Background:
- Infrared (IR) spectra of heterogeneous media are distorted by optical phenomena like scattering and reflection.
- These distortions, including baseline shifts and band changes, obscure molecular information and invalidate the Beer-Lambert law.
- Accurate interpretation of IR spectra requires removing these optical artefacts to recover pure sample absorbance.
Purpose of the Study:
- To develop and validate a deep learning approach for removing optical artefacts from IR spectra.
- To recover the true absorbance of a sample from its measured apparent absorbance.
- To assess the generalization performance of the proposed method on diverse datasets.
Main Methods:
- A 1-dimensional U-Net deep convolutional neural network (1D U-Net) was employed for artefact removal.
- A simulated dataset of apparent absorbance and true absorbance pairs for poly(methyl methacrylate) (PMMA) spheres was generated using Mie theory.
- The 1D U-Net was trained on augmented simulated data and validated using independent simulated and experimental datasets.
Main Results:
- The 1D U-Net successfully retrieved pure absorbance, even when optical artefacts dominated the measured spectra.
- High accuracy in artefact removal was confirmed by the hit-quality-index (HQI) comparing corrected and true absorbance.
- The network demonstrated good generalization capabilities, performing well on data with different artefact patterns than the training set.
Conclusions:
- Deep learning, specifically 1D U-Net, offers a powerful solution for correcting optical artefacts in IR spectroscopy.
- The method significantly improves the interpretability of IR spectra from complex heterogeneous samples.
- The validated approach provides a reliable tool for accurate molecular analysis in materials science and beyond.
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