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Identification and Characterization of a Neutral Locus for Knock-in Purposes in C. parapsilosis
Tibor Nemeth1, Csaba Papp1, Csaba Vagvolgyi1
1Department of Microbiology, University of Szeged, Szeged, Hungary.
Abstract:
Invasive fungal infections caused by Candida species affect approximately 700,000 people worldwide resulting in 300,000 deaths annually. Besides Candida albicans, other members of the genus have gained relevance in the last two decades, including C. parapsilosis whose incidence is particularly high amongst low birth weight neonates. To investigate the virulence properties of this pathogen several techniques have been developed for generating knock-out mutants, however, no target locus for knock-in approaches have been published so far. Here we report CpNEUT5L (N5L), an intergenic locus in C. parapsilosis, and introduce an integrative GatewayTM and a classical ligation based replacement plasmid to target it with. As a proof of principle, we fluorescently tagged laboratory and prototroph strains and established that this locus is also suitable for reintegration purposes. We concluded that GFP-expressing constructs integrated into this region provide strong, homogenous fluorescent signals while alteration of this locus affects neither the growth of the mutants in liquid or on solid media, even in the presence of different stressors, nor their basic virulence properties. Hence, our findings demonstrate that N5L is a highly effective neutral locus for knock-in approaches in C. parapsilosis.
Insights
Researchers identified a new genetic locus, CpNEUT5L (N5L), in Candida parapsilosis. This neutral site enables efficient gene knock-in, aiding the study of fungal pathogens and their virulence factors.
Area of Science:
- Medical Mycology
- Molecular Biology
- Genetics
Background:
- Invasive fungal infections caused by Candida species are a significant global health concern, with Candida parapsilosis posing a particular threat to neonates.
- Investigating Candida parapsilosis virulence requires genetic manipulation tools, but suitable knock-in loci have been lacking.
Purpose of the Study:
- To identify and characterize a novel, neutral genetic locus in Candida parapsilosis for gene knock-in applications.
- To develop and validate plasmids for targeting this locus using both Gateway and classical ligation methods.
Main Methods:
- Identification of the intergenic locus CpNEUT5L (N5L) in Candida parapsilosis.
- Development of integrative replacement plasmids for Gateway and classical ligation.
- Fluorescent tagging of laboratory and prototroph strains by integrating constructs into the N5L locus.
- Assessment of growth under stress conditions and basic virulence properties of modified strains.
Main Results:
- The CpNEUT5L (N5L) locus was successfully utilized for gene knock-in in Candida parapsilosis.
- Integration of GFP-expressing constructs yielded strong, homogenous fluorescent signals.
- Mutants with alterations at the N5L locus exhibited no significant changes in growth or basic virulence properties, even under stress.
Conclusions:
- CpNEUT5L (N5L) is a highly effective neutral locus for knock-in approaches in Candida parapsilosis.
- This locus facilitates the study of fungal pathogen virulence and the development of new therapeutic strategies.
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