Human primary neutrophil mRNA does not contaminate human resolving macrophage mRNA after efferocytosis

M Maraux1, A Gaillardet1, A Gally1

  • 1Univ. Bourgogne Franche-Comté, INSERM, EFS BFC, UMR1098, Interactions Hôte-Greffon-Tumeur/Ingénierie Cellulaire et Génique, Fédération Hospitalo-Universitaire INCREASE, LabEx LipSTIC, F-25000 Besançon, France.

Insights

This study validates a human cell co-culture model for studying resolving macrophages. It confirms that neutrophil mRNA does not contaminate macrophage mRNA, making it ideal for RNA sequencing in inflammation resolution research.

Area of Science:

  • Immunology
  • Cell Biology

Background:

  • Efferocytosis, the engulfment of apoptotic cells by macrophages, is vital for resolving inflammation and promoting tissue repair.
  • Resolving macrophages, key players in this process, are poorly understood, particularly in human systems.
  • Global gene expression studies like RNA sequencing are needed to characterize these cells, but ingested mRNA contamination is a concern.

Purpose of the Study:

  • To assess the suitability of a primary human neutrophil and monocyte-derived macrophage co-culture model for investigating resolving macrophages.
  • To determine if ingested neutrophil mRNA contaminates macrophage mRNA in this co-culture system, impacting downstream RNA sequencing.
  • To evaluate if this co-culture model induces unwanted neutrophil activation or macrophage pro-inflammatory responses.

Main Methods:

  • Established a co-culture system using primary human neutrophils and primary human monocyte-derived macrophages.
  • Developed and applied protocols to assess mRNA degradation and cross-contamination within the co-culture.
  • Analyzed neutrophil activation markers and macrophage pro-inflammatory cytokine release.

Main Results:

  • Demonstrated severe degradation of ingested neutrophil mRNA, preventing cross-contamination of resolving macrophage mRNA.
  • Showed that this degradation is specific, as apoptotic peripheral blood mononuclear cells (PBMCs) or Jurkat cells did cause contamination.
  • Confirmed that the co-culture system does not induce significant neutrophil activation or pro-inflammatory cytokine release from macrophages.

Conclusions:

  • The primary human neutrophil and monocyte-derived macrophage co-culture model is validated as a suitable system for mRNA investigations in human resolving macrophages.
  • This model effectively minimizes confounding factors like mRNA cross-contamination, enabling accurate characterization of resolving macrophages.
  • The findings support the use of this model to advance our understanding of inflammation resolution and tissue repair mechanisms.