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Comprehensive analysis of the effect of rs2295080 and rs2536 polymorphisms within the mTOR gene on cancer risk
Guang-Hui Qi1, Chun-Hui Wang2, Hong-Ge Zhang3
1Department of Urology, The First Hospital of Zibo City, Zibo, Shandong 255000, China.
Abstract:
There is still no conclusion on the potential effect of the rs2295080 and rs2536 polymorphisms of mTOR (mammalian target of rapamycin) gene on different cancers. Herein, we performed a comprehensive assessment using pooled analysis, FPRP (false-positive report probability), TSA (trial sequential analysis), and eQTL (expression quantitative trait loci) analysis. Eighteen high-quality articles from China were enrolled. The pooled analysis of rs2295080 with 9502 cases and 10,965 controls showed a decreased risk of urinary system tumors and specific prostate cancers [TG vs. TT, TG+GG vs. TT and G vs. T; P<0.05, OR (odds ratio) <1]. FPRP and TSA data further confirmed these results. There was an increased risk of leukemia [G vs. T, GG vs. TT, and GG vs. TT+TG genotypes; P<0.05, OR>1]. The eQTL data showed a potential correlation between the rs2295080 and mTOR expression in whole blood samples. Nevertheless, FPRP and TSA data suggested that more evidence is required to confirm the potential role of rs2295080 in leukemia risk. The pooled analysis of rs2536 (6653 cases and 7025 controls) showed a significant association in the subgroup of "population-based" control source via the allele, heterozygote, dominant, and carrier comparisons (P<0.05, OR>1). In conclusion, the TG genotype of mTOR rs2295080 may be linked to reduced susceptibility to urinary system tumors or specific prostate cancers in Chinese patients. The currently data do not strongly support a role of rs2295080 in leukemia susceptibility. Large sample sizes are needed to confirm the potential role of rs2536 in more types of cancer.
Insights
The mTOR gene rs2295080 polymorphism may lower the risk of urinary and prostate cancers in Chinese individuals. More research is needed to confirm its role in leukemia and other cancers.
Area of Science:
- Genetics
- Oncology
- Molecular Biology
Background:
- The role of mTOR (mammalian target of rapamycin) gene polymorphisms, specifically rs2295080 and rs2536, in various cancers remains unclear.
- Previous studies have yielded inconclusive results regarding the association between these polymorphisms and cancer risk.
Purpose of the Study:
- To comprehensively assess the association between mTOR gene polymorphisms (rs2295080 and rs2536) and cancer risk.
- To evaluate the potential impact of rs2295080 on mTOR gene expression.
- To clarify the conflicting findings regarding these genetic variations and cancer susceptibility.
Main Methods:
- Performed a pooled analysis of 18 high-quality studies from China.
- Utilized False-Positive Report Probability (FPRP) and Trial Sequential Analysis (TSA) to validate findings.
- Conducted Expression Quantitative Trait Loci (eQTL) analysis to investigate gene expression correlation.
Main Results:
- Pooled analysis of rs2295080 indicated a decreased risk for urinary system tumors and specific prostate cancers (TG vs. TT, TG+GG vs. TT, G vs. T).
- rs2295080 was associated with an increased risk of leukemia (G vs. T, GG vs. TT, GG vs. TT+TG genotypes), though further evidence is required.
- eQTL analysis suggested a correlation between rs2295080 and mTOR expression in whole blood.
- rs2536 showed a significant association in the 'population-based' control subgroup across multiple comparison models.
Conclusions:
- The TG genotype of mTOR rs2295080 may reduce susceptibility to urinary system tumors and certain prostate cancers in Chinese populations.
- Current evidence does not strongly support a role for rs2295080 in leukemia risk, necessitating more research.
- Larger sample sizes are required to confirm the role of rs2536 in a broader range of cancers.
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