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Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

7.8K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
7.8K
Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

3.3K
3.3K
Synteny and Evolution02:31

Synteny and Evolution

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John H. Renwick first coined the term “synteny” in 1971, which refers to the genes present on the same chromosomes, even if they are not genetically linked. The species with common ancestry tend to show conserved syntenic regions. Therefore, the concept of synteny is nowadays used to describe the evolutionary relationship between species.
Around 80 million years ago, the human and mice lineages diverged from the common ancestor. During the course of evolution, the ancestral...
3.6K
Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

6.7K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
6.7K
Gene Duplication and Divergence02:37

Gene Duplication and Divergence

7.7K
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was  generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
7.7K
Genome Size and the Evolution of New Genes03:21

Genome Size and the Evolution of New Genes

8.9K
While every living organism has a genome of some kind (be it RNA, or DNA), there is considerable variation in the sizes of these blueprints. One major factor that impacts genome size is whether the organism is prokaryotic or eukaryotic. In prokaryotes, the genome contains little to no non-coding sequence, such that genes are tightly clustered in groups or operons sequentially along the chromosome. Conversely, the genes in eukaryotes are punctuated by long stretches of non-coding sequence.
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Related Experiment Video

Updated: Dec 16, 2025

A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seq
07:09

A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seq

Published on: May 28, 2021

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Archaic hominin genomics provides a window into gene expression evolution.

Stephanie M Yan1, Rajiv C McCoy1

  • 1Department of Biology, Johns Hopkins University, Baltimore, MD, 21218, USA.

Current Opinion in Genetics & Development
|July 3, 2020
PubMed
Summary

Studying gene expression differences between humans and archaic hominins like Neanderthals offers insights into evolution. Advances in genomics are overcoming challenges posed by ancient RNA degradation to reveal regulatory evolution.

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Related Experiment Videos

Last Updated: Dec 16, 2025

A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seq
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Area of Science:

  • Evolutionary Biology
  • Genomics
  • Paleontology

Background:

  • Gene expression differences are key to phenotypic variation within and between species.
  • Studying gene expression provides insights into human evolution, particularly divergence from Neanderthals and Denisovans.
  • This complements fossil evidence and reveals patterns in regulatory evolution.

Purpose of the Study:

  • To investigate hominin gene expression evolution.
  • To understand the mode and tempo of regulatory evolution.
  • To overcome challenges in studying ancient hominin gene expression.

Main Methods:

  • Indirect study of archaic hominin gene expression due to ancient RNA degradation.
  • Leveraging advances in ancient genomics, functional genomics, statistical genomics, and genome engineering.
  • Addressing assumptions related to the genetic architecture of gene expression.

Main Results:

  • Gene expression analysis offers a powerful method for studying hominin divergence.
  • Regulatory evolution insights are gained through comparative gene expression studies.
  • Technical and conceptual advances are transforming the field.

Conclusions:

  • Despite challenges with ancient RNA, gene expression studies are crucial for understanding human evolution.
  • Modern genomic techniques are revolutionizing the study of archaic hominin gene expression.
  • Future research will continue to refine our understanding of regulatory evolution in hominins.