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Updated: Dec 16, 2025

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Published on: October 13, 2023
Reliability and comparability of human brain structural covariance networks
Jona Carmon1, Jil Heege2, Joe H Necus3
1Institute of Cognitive Science, Osnabrueck University, Osnabrueck, Germany.
Structural MRI analysis shows significant differences in brain region correlations across datasets and scans. Cortical thickness is less reliable; surface area and volume are preferred for robust structural covariance analysis.
Area of Science:
- Neuroimaging
- Brain anatomy
- Structural MRI
Background:
- Structural covariance analysis (SCA) is a key neuroimaging technique.
- SCA characterizes morphological correlations between brain regions in healthy subjects.
- Comparability and reliability of SCA results across datasets and scan parameters are under-investigated.
Purpose of the Study:
- To assess the comparability of SCA results between different datasets of healthy adults.
- To evaluate the reliability of SCA results across repeated scans, varying image resolutions, and FreeSurfer versions.
- To identify optimal practices for robust structural covariance analysis.
Main Methods:
- Compared structural covariance matrices from different datasets of age- and sex-matched healthy adults.
- Assessed reliability using repeated scan sessions, different image resolutions, and FreeSurfer versions.
- Estimated relative measurement error for different morphological measures (cortical thickness, surface area, volume).
- Utilized simulated data to investigate measurement error influences.
Main Results:
- Substantial differences in structural covariance were found between datasets, persisting after site correction.
- Differences were exacerbated by small sample sizes and most pronounced with cortical thickness.
- Reliability issues were observed across repeated scans, resolutions, and FreeSurfer versions.
- Cortical thickness exhibited the largest relative measurement error, impacting reliability.
Conclusions:
- Combining data across sites with differing parameters is not recommended due to significant result variability.
- Surface area and volume are more reliable morphological measures than cortical thickness for SCA.
- Large sample sizes (n≫30) are crucial for reliable structural covariance estimation.
- Explicitly measuring and modeling error covariance is necessary when combining sites.
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