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Published on: August 20, 2019
An Indian child with Coats plus syndrome due to mutations in STN1
Gouri Rao Passi1, Uzma Shamim2, Surabhi Rathore3
1Department of Pediatrics, Choithram Hospital & Research Centre, Indore, India.
Insights
This study identifies novel STN1 gene variants causing Coats plus syndrome in an Indian child. Genetic analysis and simulations revealed the impact of these variants on the CST complex, with limited success from hormonal therapy.
Area of Science:
- Genetics
- Molecular Biology
- Ophthalmology
Background:
- The CTC1-STN1-TEN1 (CST) complex is crucial for telomere maintenance and genome stability.
- Coats plus syndrome (CP) is a rare genetic disorder characterized by telomeropathy and other severe symptoms.
- Understanding the genetic basis of CP is vital for diagnosis and potential therapeutic strategies.
Observation:
- An Indian child presented with clinical features of CP, including retinal exudates, cerebral calcification, developmental delay, and chronic gastrointestinal bleeding.
- Whole exome sequencing identified compound heterozygous variants in the STN1 gene.
- One variant was a known nonsense variant (p.Arg133*), while the second (p.Ala329Pro) was novel.
Findings:
- The novel p.Ala329Pro variant in STN1 was investigated using molecular dynamics simulations.
- Simulations indicated that this mutation disrupts the interaction within the C-terminal domain of the STN1-TEN1 complex.
- This disruption likely contributes to the pathogenesis of CP in the affected child.
Implications:
- This case expands the known spectrum of STN1 variants associated with Coats plus syndrome.
- The findings highlight the importance of genetic analysis in diagnosing complex pediatric disorders.
- Hormonal therapy showed a transient, modest benefit in reducing transfusion needs, suggesting avenues for further investigation.
Abstract:
The role of the CTC1-STN1-TEN1 (CST) complex in Coats plus syndrome (CP), as well as other telomeropathy-phenotypes and disorders of genome instability is well documented. We report an Indian child with a clinical diagnosis of CP who presented to us with retinal exudates, extensive cerebral calcification, developmental delay and severe anemia consequent upon chronic gastrointestinal (GI) bleeding. Whole exome sequencing revealed compound heterozygous variants in STN1 as the probable genetic cause leading to CP in the present case. Of the two variants, the nonsense variant c.397C>T (p.Arg133*) was a truncating variant leading to loss of full protein length whereas the second variant c.985G>C (p.Ala329Pro) was novel and neither reported in ExAC, 1KGP or gnomAD. The deleteriousness of the novel variant was explored through molecular dynamics simulation analysis where p.Ala329Pro mutation affected C-terminal domain interaction between STN1 and TEN1 complex. Hormonal therapy using ethinyl estradiol and norethisterone was apparently associated with a clinically useful, although poorly sustained, decrease in blood transfusion requirement in the proband.
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