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Updated: Dec 14, 2025

Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
Contribution of DNA methylation and EZH2 in SRBC down-regulation in gastric cancer
Shiva Rezaei1, Mohammad Ali Hosseinpourfeizi2, Yaghoub Moaddab3
1Department of Animal Biology, Faculty of Natural Sciences, University of Tabriz, Tabriz, Iran.
Abstract:
Gastric cancer (GC), a high mortality malignancy, is induced by genetic and epigenetic factors. DNA and histone methylation play critical roles in tumor suppressor genes inactivation. SRBC (serum deprivation response factor-related gene product that binds to the c-kinase), suggested as a tumor suppressor gene, participates in apoptosis, tumor chemoresistance and DNA damage response and is repressed in various cancers. Inspecting the mechanisms underlying SRBC suppression is important for cancer treatments. We investigated SRBC promoter DNA methylation status and expression of SRBC and EZH2 histone methyltrasferase in gastric cancer. Also, we surveyed SRBC expression after 5-azacitidine and UNC1999 treatments of AGS cell line. In current work, we used gastric adenocarcinoma tissues, marginal samples and normal gastric biopsies. DNA methylation was detected by Methylation- Specific PCR and mRNA expression was measured by Real-Time PCR. SRBC promoter methylation analysis, showed fully and partial methylated versions that were associated with patient's age (p = 0.001). SRBC expression significantly decreased in GC compare with marginal and normal samples (p-value < 0.001). EZH2 showed remarkable up-regulation in GC than controls and demonstrated a strong inverse correlation with SRBC expression (r = - 0.69). Restoration of SRBC expression was observed after 5-azacitidine and UNC1999 applications with a remarkable increase by combinational treatment. We showed that EZH2 plays role in SRBC silencing in addition to DNA methylation. Our study, suggests that DNA methylation and EZH2 are involved in SRBC silencing and their inhibitors can be considered in cancer treatment investigations to overcome chemoresistance induced by SRBC inactivation.
Insights
Gastric cancer (GC) involves SRBC gene silencing via DNA methylation and EZH2. Inhibiting these mechanisms may overcome chemoresistance, offering new cancer treatment strategies.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Gastric cancer (GC) is a deadly malignancy driven by genetic and epigenetic alterations.
- DNA and histone methylation are key mechanisms in tumor suppressor gene inactivation.
- SRBC, a potential tumor suppressor, is repressed in various cancers, impacting apoptosis and chemoresistance.
Purpose of the Study:
- Investigate the mechanisms of SRBC silencing in gastric cancer.
- Analyze SRBC promoter DNA methylation and EZH2 expression in GC.
- Evaluate the impact of epigenetic modifiers on SRBC expression.
Main Methods:
- Utilized gastric adenocarcinoma tissues, marginal, and normal biopsies.
- Assessed DNA methylation using Methylation-Specific PCR.
- Measured mRNA expression via Real-Time PCR and analyzed EZH2 correlation.
Main Results:
- SRBC promoter methylation correlated with patient age (p=0.001).
- SRBC expression was significantly decreased in GC tissues (p<0.001).
- EZH2 was upregulated in GC and inversely correlated with SRBC expression (r=-0.69).
- SRBC expression was restored by 5-azacitidine and UNC1999, with enhanced restoration upon combination.
Conclusions:
- DNA methylation and EZH2 are implicated in SRBC silencing in gastric cancer.
- EZH2 contributes to SRBC silencing alongside DNA methylation.
- Targeting DNA methylation and EZH2 may offer strategies to overcome SRBC inactivation-induced chemoresistance in GC.
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