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Updated: Dec 14, 2025

Generation of Genomic Deletions in Mammalian Cell Lines via CRISPR/Cas9
Published on: January 3, 2015
Schimke XLID syndrome results from a deletion in BCAP31
Raymond J Louie1, Debra L Collins2, Michael J Friez1
1Greenwood Genetic Center, Greenwood, South Carolina, USA.
Abstract:
A family with three affected males and a second family with a single affected male with intellectual disability, microcephaly, ophthalmoplegia, deafness, and Involuntary limb movements were reported by Schimke and Associates in 1984. The affected males with Schimke X-linked intellectual disability (XLID) syndrome (OMIM# 312840) had a similar facial appearance with deep-set eyes, downslanting palpebral fissures, hypotelorism, narrow nose and alae nasi, cupped ears and spacing of the teeth. Two mothers had mild hearing loss but no other manifestations of the disorder. The authors considered the disorder to be distinctive and likely X-linked. Whole genome sequencing in the single affected male available and the three carrier females from one of the families with Schimke XLID syndrome identified a 2 bp deletion in the BCAP31 gene. During the past decade, pathogenic alterations of the BCAP31 gene have been associated with deafness, dystonia, and central hypomyelination, an XLID condition given the eponym DDCH syndrome. A comparison of clinical findings in Schimke XLID syndrome and DDCH syndrome shows them to be the same clinical entity. The BCAP31 protein functions in endoplasmic reticulum-associated degradation to promote ubiquitination and destruction of misfolded proteins.
Insights
Schimke X-linked intellectual disability (XLID) syndrome is caused by a BCAP31 gene deletion. This finding links Schimke XLID and DDCH syndrome, revealing a shared genetic basis for these neurodevelopmental disorders.
Area of Science:
- Genetics
- Neuroscience
- Molecular Biology
Background:
- Schimke X-linked intellectual disability (XLID) syndrome, described in 1984, presents with intellectual disability, microcephaly, ophthalmoplegia, deafness, and involuntary limb movements.
- Affected males exhibit a distinctive facial appearance including deep-set eyes, downslanting palpebral fissures, hypotelorism, a narrow nose, and cupped ears.
Observation:
- Whole genome sequencing was performed on an affected male and carrier females from families with Schimke XLID syndrome.
- A 2 bp deletion in the BCAP31 gene was identified as the causative genetic alteration.
Findings:
- Pathogenic BCAP31 gene alterations have previously been linked to deafness, dystonia, and central hypomyelination (DDCH syndrome), another XLID condition.
- Clinical comparison confirms that Schimke XLID syndrome and DDCH syndrome represent the same clinical entity.
Implications:
- This discovery establishes a unified understanding of XLID conditions associated with BCAP31 mutations.
- The BCAP31 protein's role in endoplasmic reticulum-associated degradation highlights a key molecular pathway in neurodevelopmental disorders.
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