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Published on: January 31, 2020
Run-and-tumble bacteria slowly approaching the diffusive regime.
Andrea Villa-Torrealba1, Cristóbal Chávez-Raby1, Pablo de Castro1
1Departamento de Física, Facultad de Ciencias Físicas y Matemáticas, Universidad de Chile, Avenida Blanco Encalada 2008, Santiago, Chile.
Bacterial run-and-tumble (RT) dynamics transition from ballistic to diffusive motion. This study reveals that deviations from diffusion persist longer than expected, especially in modified RT models, impacting particle displacement distributions.
Area of Science:
- Statistical Physics
- Biophysics
- Soft Matter Physics
Background:
- Bacterial swimmers exhibit run-and-tumble (RT) dynamics, transitioning from ballistic motion to diffusive behavior.
- Characterizing this transition requires more than just mean-squared displacement (MSD), necessitating analysis of displacement distribution.
Purpose of the Study:
- To determine the time scale for dilute bacterial swimmer suspensions to reach the diffusive regime.
- To quantify deviations from diffusive dynamics, focusing on excess kurtosis and non-Gaussian behavior.
- To investigate four distinct bacterial swimming strategies: conventional RT, partial reorientation, run-and-reverse, and protein-concentration-dependent RT.
Main Methods:
- Analysis of kinetic equations for the probability density function.
- Computer simulations of the four swimming models.
- Theoretical approach using eigenvalue and angular Fourier expansions of the van Hove function.
Main Results:
- Models with partial reorientation, run-and-reverse, and protein-dependent tumbling show prolonged relaxation to diffusion, with large displacement tails.
- Significant positive excess kurtosis values were observed, indicating non-Gaussian displacement distributions.
- Linear MSD was achieved in some partial reorientation and low rotational diffusivity run-and-reverse models, yet dynamics remained non-Gaussian.
Conclusions:
- The transition to diffusion in bacterial swimming is complex and can be significantly delayed in modified RT models.
- Excess kurtosis is a crucial metric for identifying non-Gaussian dynamics, even when MSD appears linear.
- Theoretical predictions align well with simulation results, validating the analytical approach for understanding bacterial motility.
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