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Updated: Dec 14, 2025

Detection of Nuclear Blebbing and DNA Leakage in Mammalian Cells by Immunofluorescence
Published on: January 17, 2025
Defects in mtDNA replication challenge nuclear genome stability through nucleotide depletion and provide a unifying
Riikka H Hämäläinen1,2, Juan C Landoni3, Kati J Ahlqvist3
1A.I. Virtanen Institute for Molecular Sciences, University of Eastern Finland, Kuopio, Finland. riikka.martikainen@uef.fi.
Abstract:
Mitochondrial DNA (mtDNA) mutagenesis and nuclear DNA repair defects are considered cellular mechanisms of ageing. mtDNA mutator mice with increased mtDNA mutagenesis show signs of premature ageing. However, why patients with mitochondrial diseases, or mice with other forms of mitochondrial dysfunction, do not age prematurely remains unknown. Here, we show that cells from mutator mice display challenged nuclear genome maintenance similar to that observed in progeric cells with defects in nuclear DNA repair. Cells from mutator mice show slow nuclear DNA replication fork progression, cell cycle stalling and chronic DNA replication stress, leading to double-strand DNA breaks in proliferating progenitor or stem cells. The underlying mechanism involves increased mtDNA replication frequency, sequestering of nucleotides to mitochondria, depletion of total cellular nucleotide pools, decreased deoxynucleoside 5'-triphosphate (dNTP) availability for nuclear genome replication and compromised nuclear genome maintenance. Our data indicate that defects in mtDNA replication can challenge nuclear genome stability. We suggest that defects in nuclear genome maintenance, particularly in the stem cell compartment, represent a unified mechanism for mouse progerias. Therefore, through their destabilizing effects on the nuclear genome, mtDNA mutations are indirect contributors to organismal ageing, suggesting that the direct role of mtDNA mutations in driving ageing-like symptoms might need to be revisited.
Insights
Mitochondrial DNA (mtDNA) mutations indirectly cause aging by depleting nucleotides needed for nuclear DNA repair. This nuclear genome instability, especially in stem cells, drives premature aging, challenging mtDNA
Area of Science:
- Cellular and Molecular Biology
- Genetics and Genomics
- Aging Research
Background:
- Mitochondrial DNA (mtDNA) mutagenesis and nuclear DNA repair defects are linked to cellular aging mechanisms.
- Mitochondrial disease patients and mice with mitochondrial dysfunction do not exhibit premature aging, posing a research question.
Purpose of the Study:
- To investigate the relationship between mitochondrial dysfunction, nuclear genome maintenance, and premature aging.
- To elucidate the mechanisms by which mitochondrial DNA replication defects impact nuclear genome stability and organismal aging.
Main Methods:
- Analysis of nuclear genome maintenance in cells from mtDNA mutator mice.
- Assessment of DNA replication fork progression, cell cycle dynamics, and DNA damage.
- Investigation of nucleotide pool dynamics and their impact on nuclear DNA replication.
Main Results:
- Cells from mtDNA mutator mice exhibit impaired nuclear genome maintenance, characterized by slow replication fork progression and DNA double-strand breaks.
- Increased mtDNA replication sequesters nucleotides, depleting cellular pools and reducing deoxynucleoside 5'-triphosphate (dNTP) availability for nuclear DNA replication.
- Defects in mtDNA replication compromise nuclear genome stability, particularly in proliferating progenitor and stem cells.
Conclusions:
- Defects in mitochondrial DNA replication can directly challenge nuclear genome stability.
- Nuclear genome maintenance defects, especially in stem cells, may represent a unified mechanism for premature aging in mice.
- Mitochondrial DNA mutations contribute indirectly to organismal aging through their destabilizing effects on the nuclear genome.
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