SERS-Based Assessment of MRD in Acute Promyelocytic Leukemia?
Cristina Turcas1,2, Vlad Moisoiu1,3, Andrei Stefancu3
1Department of Hematology, Iuliu Hatieganu University of Medicine and Pharmacy, Cluj-Napoca, Romania.
Abstract:
Acute promyelocytic leukemia (APL) is characterized by a unique chromosome translocation t(15;17)(q24;q21), which leads to the PML/RARA gene fusion formation. However, it is acknowledged that this rearrangement alone is not able to induce the whole leukemic phenotype. In addition, epigenetic processes, such as DNA methylation, may play a crucial role in leukemia pathogenesis. DNA methylation, catalyzed by DNA methyltransferases (DNMTs), involves the covalent transfer of a methyl group (-CH3) to the fifth carbon of the cytosine ring in the CpG dinucleotide and results in the formation of 5-methylcytosine (5-mC). The aberrant gene promoter methylation can be an alternative mechanism of tumor suppressor gene inactivation. Understanding cancer epigenetics and its pivotal role in oncogenesis, can offer us not only attractive targets for epigenetic treatment but can also provide powerful tools in monitoring the disease and estimating the prognosis. Several genes of interest, such as RARA, RARB, p15, p16, have been studied in APL and their methylation status was correlated with potential diagnostic and prognostic significance. In the present manuscript we comprehensively examine the current knowledge regarding DNA methylation in APL pathogenesis. We also discuss the perspectives of using the DNA methylation patterns as reliable biomarkers for measurable residual disease (MRD) monitoring and as a predictor of relapse. This work also highlights the possibility of detecting aberrant methylation profiles of circulating tumor DNA (ctDNA) through liquid biopsies, using the conventional methods, such as methylation-specific polymerase chain reaction (MS-PCR), sequencing methods, but also revolutionary methods, such as surface-enhanced Raman spectroscopy (SERS).
Insights
DNA methylation is crucial in acute promyelocytic leukemia (APL) pathogenesis beyond the PML/RARA gene fusion. Aberrant methylation patterns show promise as biomarkers for monitoring residual disease and predicting relapse.
Area of Science:
- Hematology
- Molecular Biology
- Epigenetics
Background:
- Acute promyelocytic leukemia (APL) arises from the t(15;17) translocation forming the PML/RARA gene fusion.
- This genetic alteration alone is insufficient to cause the full leukemic phenotype, suggesting additional regulatory mechanisms are involved.
- Epigenetic modifications, particularly DNA methylation, are increasingly recognized for their critical role in leukemia development.
Purpose of the Study:
- To comprehensively review the current understanding of DNA methylation's role in APL pathogenesis.
- To explore the potential of DNA methylation patterns as biomarkers for measurable residual disease (MRD) monitoring.
- To discuss the utility of DNA methylation as a predictor of relapse in APL patients.
Main Methods:
- Review of existing literature on DNA methylation in APL.
- Analysis of studies correlating gene promoter methylation status with diagnostic and prognostic significance.
- Discussion of emerging technologies for detecting aberrant methylation in circulating tumor DNA (ctDNA).
Main Results:
- Aberrant DNA methylation can inactivate tumor suppressor genes, contributing to leukemogenesis in APL.
- Specific gene methylation statuses (e.g., RARA, RARB, p15, p16) have shown correlations with APL diagnosis and prognosis.
- Liquid biopsy techniques, including MS-PCR, sequencing, and SERS, show potential for detecting ctDNA methylation.
Conclusions:
- DNA methylation is a key epigenetic mechanism in APL pathogenesis, complementing genetic alterations.
- Aberrant methylation profiles hold significant potential as reliable biomarkers for MRD monitoring and relapse prediction.
- Advanced detection methods for ctDNA methylation could revolutionize APL management and patient outcomes.
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