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Structural Insights into the SPRED1-Neurofibromin-KRAS Complex and Disruption of SPRED1-Neurofibromin Interaction by
Wupeng Yan1, Evan Markegard2, Srisathiyanarayanan Dharmaiah1
1NCI RAS Initiative, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc., Frederick, MD 21701, USA.
Abstract:
Sprouty-related, EVH1 domain-containing (SPRED) proteins negatively regulate RAS/mitogen-activated protein kinase (MAPK) signaling following growth factor stimulation. This inhibition of RAS is thought to occur primarily through SPRED1 binding and recruitment of neurofibromin, a RasGAP, to the plasma membrane. Here, we report the structure of neurofibromin (GTPase-activating protein [GAP]-related domain) complexed with SPRED1 (EVH1 domain) and KRAS. The structure provides insight into how the membrane targeting of neurofibromin by SPRED1 allows simultaneous interaction with activated KRAS. SPRED1 and NF1 loss-of-function mutations occur across multiple cancer types and developmental diseases. Analysis of the neurofibromin-SPRED1 interface provides a rationale for mutations observed in Legius syndrome and suggests why SPRED1 can bind to neurofibromin but no other RasGAPs. We show that oncogenic EGFR(L858R) signaling leads to the phosphorylation of SPRED1 on serine 105, disrupting the SPRED1-neurofibromin complex. The structural, biochemical, and biological results provide new mechanistic insights about how SPRED1 interacts with neurofibromin and regulates active KRAS levels in normal and pathologic conditions.
Insights
Sprouty-related, EVH1 domain-containing protein 1 (SPRED1) binds neurofibromin, regulating RAS/MAPK signaling. This interaction is disrupted by cancer-associated mutations and EGFR signaling, impacting cell growth.
Area of Science:
- Molecular Biology
- Cell Signaling
- Structural Biology
Background:
- Sprouty-related, EVH1 domain-containing (SPRED) proteins are negative regulators of RAS/mitogen-activated protein kinase (MAPK) signaling.
- SPRED1 is believed to inhibit RAS by recruiting neurofibromin, a Ras GTPase-activating protein (RasGAP), to the plasma membrane.
Purpose of the Study:
- To elucidate the structural basis of the SPRED1-neurofibromin interaction and its role in RAS/MAPK pathway regulation.
- To investigate the impact of mutations and oncogenic signaling on the SPRED1-neurofibromin complex and its function.
Main Methods:
- X-ray crystallography to determine the structure of the neurofibromin GAP domain complexed with SPRED1 and KRAS.
- Biochemical assays to analyze SPRED1-neurofibromin binding and RasGAP activity.
- Cellular assays to assess the effect of oncogenic signaling on SPRED1 phosphorylation and complex stability.
Main Results:
- The crystal structure reveals how SPRED1 targets neurofibromin to the membrane for simultaneous interaction with activated KRAS.
- Analysis of the interface explains mutations in Legius syndrome and SPRED1's specificity for neurofibromin.
- Oncogenic EGFR signaling phosphorylates SPRED1 at Serine 105, disrupting the SPRED1-neurofibromin complex.
Conclusions:
- SPRED1 acts as a scaffold, recruiting neurofibromin to regulate active KRAS levels.
- Dysregulation of the SPRED1-neurofibromin interaction contributes to pathologic conditions like cancer and developmental diseases.
- Understanding this complex provides mechanistic insights into RAS/MAPK pathway control.
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