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Classification of Microarray Gene Expression Data Using an Infiltration Tactics Optimization (ITO) Algorithm.

Javed Zahoor1, Kashif Zafar1

  • 1Department of Computer Science, National University of Computer and Emerging Sciences (NUCES), Lahore 54000, Pakistan.

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|July 26, 2020
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Summary
This summary is machine-generated.

This study introduces a novel Infiltration Tactics Optimization (ITO) algorithm for high-accuracy, high-reliability binary classification. ITO combines parameter-free and parameter-based methods to overcome limitations in generalized optimization challenges.

Keywords:
cancerclassificationclusteringcomputational intelligenceensemblesinfiltrationinfiltration tactics optimization algorithmmachine learningmicroarray

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Area of Science:

  • Machine Learning
  • Optimization Algorithms
  • Computational Science

Background:

  • Existing feature selection and classification techniques present trade-offs between speed and accuracy.
  • Parameter-free algorithms are fast but risk local optima, while parameter-based methods require tuning for accuracy but not necessarily reliability.
  • Achieving generalized optimization for high accuracy and reliability remains an open research challenge.

Purpose of the Study:

  • To present a novel warzone-inspired optimization algorithm, Infiltration Tactics Optimization (ITO), for creating high-accuracy-high-reliability (HAHR) binary classifiers.
  • To combine the strengths of parameter-free and parameter-based classification methods.
  • To address data scarcity issues and enhance model reliability.

Main Methods:

  • The proposed ITO algorithm employs a two-phase approach: Lightweight Infantry Group (LIG) for rapid convergence to non-local maxima, and Followup Team (FT) for advanced tuning to boost performance.
  • Each component ('soldier') within the ITO framework utilizes independently chosen subset selection, pre-processing, validation, and classification methods.
  • Heterogeneous ensembles of successful 'soldiers' are combined for optimal results.

Main Results:

  • The LIG phase achieves comparable results with 70-88% accuracy.
  • The FT phase enhances baseline performance, yielding accuracies between 75-99%.
  • The approach demonstrates flexibility with heterogeneous base classifiers and addresses data scarcity.

Conclusions:

  • The ITO algorithm successfully produces HAHR binary classifiers by integrating diverse base models.
  • The proposed method offers a robust solution for scenarios demanding both high accuracy and reliability.
  • Results are comparable to established benchmarks like MAQC-II, highlighting the algorithm's effectiveness.