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Systematic analysis of miRNAs in patients with postmenopausal osteoporosis
Yulin Li1, Zhongju Shi1, Shiqing Feng1,2
1Department of Orthopaedics, Tianjin Medical University General Hospital, Tianjin, P. R. China.
Abstract:
MicroRNAs (miRNAs) represent RNA species found in serum. Many miRNAs were observed that were related to osteoporosis and osteopenia. However, expression and function analysis of miRNAs in postmenopausal osteoporosis (PMOP) remain unaddressed. We first compared the miRNA expression of blood samples in postmenopausal women with osteopenia or with osteoporosis via analysis of GSE64433. Bioinformatics analyses were conducted to get the key miRNAs and their functions and pathways. 331 miRNAs were being identified as differentially expressed miRNAs. Among these, 122 miRNA (36.86%) were up-regulated, and the remaining 209 miRNAs (63.14%) were down-regulated. 105 genes were predicted as the targets of these miRNAs. GO enrichment analysis results showed that the miRNAs mainly enriched in DNA binding, ATP binding, gene expression, regulation of the apoptotic process, chromatin binding, and protein kinase binding. KEGG enrichment analysis results demonstrated that the miRNAs mainly enriched in the TGF beta signaling pathway, wnt signaling pathway, JAK-STAT signaling pathway, and androgen receptor signaling pathway. This study identified the abundant differentially expressed miRNAs in the blood samples of postmenopausal women with osteopenia or with osteoporosis. This study may contribute to getting new diagnostic and therapeutic strategies for PMOP.
Insights
This study identified numerous microRNAs (miRNAs) differentially expressed in postmenopausal women with osteoporosis or osteopenia. These findings offer potential for new diagnostic and therapeutic strategies for postmenopausal osteoporosis (PMOP).
Area of Science:
- Biochemistry
- Genetics
- Molecular Biology
Background:
- MicroRNAs (miRNAs) are serum RNA species implicated in osteoporosis and osteopenia.
- The expression and function of miRNAs in postmenopausal osteoporosis (PMOP) require further investigation.
Purpose of the Study:
- To compare miRNA expression in postmenopausal women with osteopenia versus osteoporosis.
- To identify key miRNAs, their functions, and associated pathways in PMOP through bioinformatics analysis.
Main Methods:
- Analysis of miRNA expression data from blood samples (GSE64433).
- Bioinformatics approaches including GO and KEGG enrichment analyses.
Main Results:
- Identified 331 differentially expressed miRNAs: 122 up-regulated and 209 down-regulated.
- Predicted 105 target genes.
- Enrichment analysis revealed involvement in DNA binding, apoptosis, TGF beta, wnt, JAK-STAT, and androgen receptor signaling pathways.
Conclusions:
- This study highlights abundant differentially expressed miRNAs in postmenopausal women with osteopenia or osteoporosis.
- These findings may pave the way for novel diagnostic and therapeutic strategies for PMOP.
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