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RAS/MAPK Pathway Driver Alterations Are Significantly Associated With Oncogenic KIT Mutations in Germ-cell Tumors
Douglas A Mata1, Soo-Ryum Yang1, Donna C Ferguson1
1Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, NY.
Objective:
To report the mutational profile and clinical outcomes of a cohort of patients with KIT-mutant seminomas and nonseminomatous germ-cell tumors (SGCT/NSGCTs).
Patients And Methods:
Retrospective cohort study of all patients with KIT-mutant GCTs sequenced at Memorial Sloan Kettering between March 2014 and March 2020. Tumors were assessed with MSK-IMPACT, a DNA next-generation sequencing assay for targeted sequencing of up to 468 key cancer genes.
Results:
Among 568 patients with GCTs, 8.1% had somatic KIT mutations, including 28 seminomas and 18 mixed/NSGCTs. Exons 17 (67.3%), 11 (22.4%), and 13 (6.1%) were most commonly affected. KIT-mutant cases were enriched for oncogenic RAS/MAPK pathway alterations compared to KIT-wildtype cases (34.8% vs 19.2%, P = .02). Among KIT-mutant cases, concurrent mutations were noted in KRAS (21.7%), RRAS2 (11.8%), CBL (6.5%), NRAS (4.3%), MAP2K1 (2.2%), and RAC1 (2.2%). Mutations in KRAS, RRAS2, and NRAS were mutually exclusive. In all, 73.9% of patients developed metastases and 95.7% received chemotherapy. No patients received KIT-directed tyrosine kinase inhibitors (TKIs). Classification as a NSGCT rather than a SGCT was associated with an increased risk of death (hazard ratio 9.1, 95% confidence interval 1.1-78.4, P = .04) while the presence of a concurrent RAS/MAPK pathway alteration was not (hazard ratio 0.8, 95% confidence interval 0.1-4.3, P = .76).
Conclusion:
Mitogenic driver alterations can co-occur with activating KIT mutations, which may explain the lack of efficacy of KIT-directed TKIs in prior trials. Novel KIT-directed TKIs that target exon 17 mutations may benefit chemotherapy-refractory patients with KIT-mutant GCTs without RAS/MAPK alterations. Dual MEK/KIT inhibitor therapy in KIT-mutant GCTs with concurrent RAS/MAPK alterations could also be a plausible therapeutic strategy.
Insights
Somatic KIT mutations occur in 8.1% of germ cell tumors (GCTs), often co-occurring with RAS/MAPK pathway alterations. Novel therapies targeting KIT or MEK/KIT may benefit patients with chemotherapy-refractory GCTs.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- Germ cell tumors (GCTs) are the most common solid malignancy in young men.
- Activating mutations in KIT, a receptor tyrosine kinase, are found in a subset of GCTs.
- Understanding the mutational landscape of KIT-mutant GCTs is crucial for developing targeted therapies.
Purpose of the Study:
- To characterize the mutational profile of KIT-mutant GCTs.
- To investigate the clinical outcomes of patients with KIT-mutant GCTs.
- To identify potential therapeutic strategies for KIT-mutant GCTs.
Main Methods:
- Retrospective cohort study of 568 GCT patients.
- DNA next-generation sequencing (MSK-IMPACT) to identify somatic mutations.
- Analysis of clinical outcomes including metastasis and treatment response.
Main Results:
- 8.1% of GCTs harbored somatic KIT mutations, predominantly in exons 17, 11, and 13.
- KIT-mutant GCTs showed enrichment for RAS/MAPK pathway alterations (34.8%) compared to KIT-wildtype (19.2%).
- Nonseminomatous GCTs (NSGCTs) had a significantly higher risk of death than seminomas; no patients received KIT-directed therapies.
Conclusions:
- Concurrent RAS/MAPK alterations may explain the limited efficacy of prior KIT-directed therapies.
- Novel KIT-directed tyrosine kinase inhibitors (TKIs) targeting exon 17 mutations could benefit chemotherapy-refractory patients lacking RAS/MAPK alterations.
- Dual MEK/KIT inhibitor therapy presents a potential strategy for KIT-mutant GCTs with concurrent RAS/MAPK alterations.
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