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Deep semi-supervised learning for brain tumor classification.

Chenjie Ge1, Irene Yu-Hua Gu2, Asgeir Store Jakola3

  • 1Dept. of Electrical Engineering, Chalmers Univ. of Technoloogy, Gothenburg, 41296, Sweden. chenjie@chalmers.se.

BMC Medical Imaging
|July 31, 2020
PubMed
Summary
This summary is machine-generated.

This study introduces a deep semi-supervised learning method to improve brain tumor classification using unlabeled MRI scans. The approach enhances glioma grading and IDH-mutation prediction accuracy, even with limited data.

Keywords:
Deep learningGliomaGradingMRIMolecular-based brain tumor classificationSemi-supervised learning

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Area of Science:

  • Medical Imaging
  • Artificial Intelligence
  • Oncology

Background:

  • Glioma classification from multi-modal MRI is crucial but challenged by unlabeled and moderately sized datasets.
  • Existing methods struggle with data scarcity and the effective utilization of unlabeled brain scans.

Purpose of the Study:

  • To develop a deep semi-supervised learning framework for enhanced glioma classification.
  • To leverage unlabeled MRI data and address overfitting in moderate-sized datasets for improved diagnostic accuracy.

Main Methods:

  • Incorporated deep Convolutional Neural Network (CNN) features into a graph-based semi-supervised learning framework.
  • Introduced a 3D-2D consistent constraint for slice-level classification consistency within 3D brain scans.
  • Utilized Generative Adversarial Networks (GANs) to create synthetic MRIs for augmenting training data and mitigating overfitting.

Main Results:

  • Achieved high performance in glioma IDH-mutation prediction (86.53% accuracy on TCGA dataset).
  • Demonstrated strong performance in glioma grading (90.70% accuracy on MICCAI dataset).
  • The proposed method effectively utilizes unlabeled data and synthetic data augmentation.

Conclusions:

  • The deep semi-supervised learning scheme is effective for glioma IDH-mutation prediction and grading.
  • The approach achieves performance comparable to state-of-the-art methods in brain tumor classification.
  • This framework offers a promising solution for improving glioma classification accuracy with limited labeled data.