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Updated: Dec 13, 2025

Measuring the Structure, Composition, and Change of Underwater Environments with Large-area Imaging
Published on: April 18, 2025
An efficient coral survey method based on a large-scale 3-D structure model obtained by Speedy Sea Scanner and U-Net
Katsunori Mizuno1, Kei Terayama2,3,4, Seiichiro Hagino5
1Graduate School of Frontier Sciences, The University of Tokyo, Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan. kmizuno@edu.k.u-tokyo.ac.jp.
Abstract:
Over the last 3 decades, a large portion of coral cover has been lost around the globe. This significant decline necessitates a rapid assessment of coral reef health to enable more effective management. In this paper, we propose an efficient method for coral cover estimation and demonstrate its viability. A large-scale 3-D structure model, with resolutions in the x, y and z planes of 0.01 m, was successfully generated by means of a towed optical camera array system (Speedy Sea Scanner). The survey efficiency attained was 12,146 m2/h. In addition, we propose a segmentation method utilizing U-Net architecture and estimate coral coverage using a large-scale 2-D image. The U-Net-based segmentation method has shown higher accuracy than pixelwise CNN modeling. Moreover, the computational cost of a U-Net-based method is much lower than that of a pixelwise CNN-based one. We believe that an array of these survey tools can contribute to the rapid assessment of coral reefs.
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