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Updated: Dec 13, 2025

Analysis of the c-KIT Ligand Promoter Using Chromatin Immunoprecipitation
Published on: June 27, 2017
c-KIT oncogene expression in PRKAR1A-mutant adrenal cortex
Kiran Nadella1, Fabio R Faucz1, Constantine A Stratakis1
1Section on Genetics and Endocrinology (SEGEN), Eunice Kennedy Shriver National Institute of Child Health & Human Development (NICHD), National Institutes of Health (NIH), Bethesda, Maryland, USA.
Abstract:
Protein kinase A (PKA) regulatory subunit type 1A (PRKAR1A) defects lead to primary pigmented nodular adrenocortical disease (PPNAD). The KIT protooncogene (c-KIT) is not known to be expressed in the normal adrenal cortex (AC). In this study, we investigated the expression of c-KIT and its ligand, stem cell factor (SCF), in PPNAD and other cortisol-producing tumors of the adrenal cortex. mRNA and protein expression, by qRT-PCR, immunohistochemistry (IHC) and immunoblotting (IB), respectively, were studied. We then tested c-KIT and SCF responses to PRKAR1A introduction and PKA stimulation in adrenocortical cell lines CAR47 and H295R, which were also treated with the KIT inhibitor, imatinib mesylate (IM). Mice xenografted with H295R cells were treated with IM. There was increased c-KIT mRNA expression in PPNAD; IHC showed KIT and SCF immunoreactivity within certain nodular areas in PPNAD. IB data was consistent with IHC and mRNA data. PRKAR1A-deficient CAR47 cells expressed c-KIT; this was enhanced by forskolin and lowered by PRKAR1A reintroduction. Knockdown of PKA's catalytic subunit (PRKACA) by siRNA reduced c-KIT levels. Treatment of the CAR47 cells with IM resulted in reduced cell viability, growth arrest, and apoptosis. Treatment with IM of mice xenografted with H295 cells inhibited further tumor growth. We conclude that c-KIT is expressed in PPNAD, an expression that appears to be dependent on PRKAR1A and/or PKA activity. In a human adrenocortical cell line and its xenografts in mice, c-KIT inhibition decreased growth, suggesting that c-KIT inhibitors may be a reasonable alternative therapy to be tested in PPNAD, when other treatments are not optimal.
Insights
Defects in PRKAR1A cause PPNAD. This study found KIT protooncogene (c-KIT) is expressed in PPNAD and inhibiting it slowed tumor growth, suggesting c-KIT inhibitors as a potential therapy for PPNAD.
Area of Science:
- Endocrinology
- Oncology
- Molecular Biology
Background:
- Primary pigmented nodular adrenocortical disease (PPNAD) is linked to Protein Kinase A (PKA) regulatory subunit type 1A (PRKAR1A) defects.
- The KIT protooncogene (c-KIT) and its ligand, stem cell factor (SCF), are not typically found in the normal adrenal cortex.
Purpose of the Study:
- To investigate the expression of c-KIT and SCF in PPNAD and other cortisol-producing adrenal tumors.
- To explore the role of PRKAR1A and PKA activity in regulating c-KIT expression.
- To evaluate the therapeutic potential of c-KIT inhibition in PPNAD models.
Main Methods:
- Quantitative real-time PCR (qRT-PCR) for mRNA expression.
- Immunohistochemistry (IHC) and immunoblotting (IB) for protein expression.
- In vitro studies using adrenocortical cell lines (CAR47, H295R) with PRKAR1A manipulation and PKA stimulation.
- In vivo studies using imatinib mesylate (IM) treatment in mice xenografted with H295R cells.
Main Results:
- Increased c-KIT mRNA expression was observed in PPNAD samples.
- KIT and SCF protein immunoreactivity was detected in nodular areas of PPNAD.
- c-KIT expression in PRKAR1A-deficient cells was enhanced by PKA stimulation and reduced by PRKAR1A reintroduction.
- Inhibition of c-KIT with imatinib mesylate reduced cell viability, induced growth arrest, and promoted apoptosis in cell lines and inhibited tumor growth in mice xenografts.
Conclusions:
- c-KIT is expressed in PPNAD, with its expression dependent on PRKAR1A and/or PKA activity.
- Inhibition of c-KIT demonstrates therapeutic potential, suggesting c-KIT inhibitors as a viable treatment option for PPNAD when other therapies are suboptimal.
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