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Geometric anomaly detection in data.

Bernadette J Stolz1, Jared Tanner1,2, Heather A Harrington1,2

  • 1Mathematical Institute, University of Oxford, Oxford OX2 6GG, United Kingdom.

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|August 5, 2020
PubMed
Summary
This summary is machine-generated.

This study introduces a novel framework for detecting anomalies in complex datasets by analyzing local topology. It partitions data into manifolds, revealing hidden structures and intersections in high-dimensional spaces.

Keywords:
persistent cohomologysingularitiesstratification inference

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Area of Science:

  • Data science
  • Topology
  • Computational geometry

Background:

  • High-dimensional data analysis often assumes data lies on a single manifold.
  • Standard methods struggle with datasets that deviate from this manifold hypothesis.
  • Detecting anomalies and interfaces in complex data remains a significant challenge.

Purpose of the Study:

  • To develop a systematic framework for detecting interfaces and anomalies in datasets that may not conform to the manifold hypothesis.
  • To provide a method for partitioning complex data into regions that can be approximated by individual manifolds.
  • To identify singular regions and intersections within high-dimensional data.

Main Methods:

  • Computing the local topology of small regions around each data point.
  • Partitioning datasets into disjoint classes based on local topological features.
  • Approximating each data partition with a single manifold of potentially different intrinsic dimensions.

Main Results:

  • Successfully identified the intersection of two surfaces in a 24-dimensional cyclo-octane conformation space.
  • Located all self-intersections of a Henneberg minimal surface in 3D space.
  • Demonstrated the ability to discover singular regions even when data points are not sampled precisely from singularities.

Conclusions:

  • The proposed local topology framework effectively detects interfaces and anomalies in data that violate the manifold hypothesis.
  • The method allows for the stratification of complex datasets into simpler, manifold-approximated components.
  • The computational approach is locally based, enabling efficient parallel processing for large datasets.