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Updated: Dec 13, 2025

Nephrotoxin Microinjection in Zebrafish to Model Acute Kidney Injury
Published on: July 17, 2016
In vivo High-Content Screening in Zebrafish for Developmental Nephrotoxicity of Approved Drugs
Jens H Westhoff1, Petrus J Steenbergen1, Laurent S V Thomas1,2,3
1Department of Pediatrics I, University Children's Hospital, Heidelberg, Germany.
Abstract:
Despite widespread drug exposure, for example during gestation or in prematurely born children, organ-specific developmental toxicity of most drugs is poorly understood. Developmental and functional abnormalities are a major cause of kidney diseases during childhood; however, the potential causal relationship to exposure with nephrotoxic drugs during nephrogenesis is widely unknown. To identify developmental nephrotoxic drugs in a large scale, we established and performed an automated high-content screen to score for phenotypic renal alterations in the Tg(wt1b:EGFP) zebrafish line. During early nephrogenesis, embryos were exposed to a compound library of approved drugs. After treatment, embryos were aligned within microtiter plates using 3D-printed orientation tools enabling the robust acquisition of consistent dorsal views of pronephric kidneys by automated microscopy. To qualitatively and quantitatively score and visualize phenotypes, we developed software tools for the semi-automated analysis, processing and visualization of this large image-based dataset. Using this scoring scheme, we were able to categorize compounds based on their potential developmental nephrotoxic effects. About 10% of tested drugs induced pronephric phenotypes including glomerular and tubular malformations, or overall changes in kidney morphology. Major chemical compound groups identified to cause glomerular and tubular alterations included dihydropyridine derivatives, HMG CoA reductase inhibitors, fibrates, imidazole, benzimidazole and triazole derivatives, corticosteroids, glucocorticoids, acetic acid derivatives and propionic acid derivatives. In conclusion, the presented study demonstrates the large-scale screening of kidney-specific toxicity of approved drugs in a live vertebrate embryo. The associated technology and tool-sets can be easily adapted for other organ systems providing a unique platform for in vivo large-scale assessment of organ-specific developmental toxicity or other biomedical applications. Ultimately, the presented data and associated visualization and browsing tools provide a resource for potentially nephrotoxic drugs and for further investigations.
Insights
This study screened approved drugs for kidney developmental toxicity using zebrafish. Approximately 10% of drugs caused kidney malformations, identifying specific drug classes as potential risks during early development.
Area of Science:
- Developmental toxicology
- Pharmacology
- Zebrafish models
Background:
- Organ-specific developmental toxicity of many drugs remains poorly understood, particularly concerning kidney development.
- Kidney diseases in children are often linked to developmental abnormalities, but the role of prenatal drug exposure is largely unknown.
- Nephrogenesis is a critical period where drug exposure can lead to long-term kidney damage.
Purpose of the Study:
- To establish and perform a large-scale, automated screening method to identify drugs causing developmental kidney toxicity.
- To investigate the effects of approved drugs on kidney development during the critical period of nephrogenesis.
- To create a resource for identifying potentially nephrotoxic drugs and understanding their mechanisms.
Main Methods:
- Utilized the *Tg(wt1b:EGFP)* zebrafish line for high-content screening of phenotypic renal alterations.
- Developed 3D-printed tools for precise embryo alignment and automated microscopy of pronephric kidneys.
- Created semi-automated software tools for quantitative scoring, analysis, and visualization of image-based data.
Main Results:
- Approximately 10% of tested approved drugs induced pronephric phenotypes, including glomerular and tubular malformations.
- Identified specific drug classes such as dihydropyridine derivatives, HMG CoA reductase inhibitors, and corticosteroids as inducers of kidney malformations.
- The screening successfully categorized compounds based on their potential for developmental nephrotoxicity.
Conclusions:
- Demonstrated a scalable method for screening kidney-specific drug toxicity in a live vertebrate embryo model.
- The developed technology and tools can be adapted for assessing developmental toxicity in other organ systems.
- The study provides valuable data on potentially nephrotoxic drugs, aiding further research and risk assessment.

