Related Experiment Video
Updated: Dec 12, 2025

Single Molecule Analysis of Laser Localized Psoralen Adducts
Published on: April 20, 2017
Reactions of a photoactivatable diazido Pt(iv) anticancer complex with a single-stranded oligodeoxynucleotide
Zujun Liang1, Jiafan Lin1, Xianxian Gong1
1Key Laboratory of Hubei Province for Coal Conversion and New Carbon Materials; School of Chemistry and Chemical Engineering, Wuhan University of Science and Technology, Wuhan 430081, P. R. China. wukui@wust.edu.cn.
Abstract:
Platinum based anticancer agents are widely applied in clinic and their major target is believed to be DNA. Herein, the interaction of a photoactivatable diazido Pt(iv) anticancer prodrug trans,trans,trans-[Pt(N3)2(OH)2(py)2] (py = pyridine; 1) with a 15-mer single-G-containing oligodeoxynucleotide (ODN I: 5'-CT2CTCTTG8T9CT11TCTC-3') was investigated by mass spectrometric methods. Up to penta-platinated ODN I adducts were identified from primary mass spectra while the mono- and di-platinated adducts had the highest intensity. Fragmentation of mono-, di- and tri-platinated I adducts in tandem MS revealed that T2, G8, T11 and T9 are binding sites. No cytosine sites were identified which may be due to the facile loss of Pt adducts from cytosine during CID. The intensity of {Pt(py)2}-bound adducts was comparable to that of {Pt(N3)(py)2}-bound adducts, indicating that the photo-reduction pathway of complex 1 from Pt(iv) to Pt(ii) through two one-electron donations from two azides was substantial. Moreover, no transformation of N3 to NH3 on the {Pt(N3)(py)2}-bound adducts was observed, whereas it is very popular during the reactions of complexes with short ODNs or mono-nucleotides. The oxidation on I induced by the reactive oxygen species (ROS) formed by the photodecomposition of complex 1 was significant, and the oxidation of G8 to 8-hydroxyguanine (8-OH-G), spiroiminodihydantoin (Sp) and 2,6-diamino-4-hydroxy-5-formamidopyrimidine (FapyG) was discovered. These results unambiguously revealed a sequence-length-dependent photochemical reactivity of complex 1 when it interacted with different ODNs, providing deeper understanding in the reactivity of photoactivatable diazido anticancer Pt(iv) prodrugs to DNA.
Insights
This study investigated a photoactivatable platinum(IV) anticancer prodrug
Area of Science:
- Medicinal Chemistry
- Biochemistry
- Analytical Chemistry
Background:
- Platinum-based anticancer drugs are a cornerstone of cancer therapy, primarily targeting DNA.
- Understanding the precise interactions of novel platinum prodrugs with DNA is crucial for developing more effective treatments.
- Photoactivatable platinum(IV) prodrugs offer potential for targeted drug delivery and activation.
Purpose of the Study:
- To investigate the interaction of a photoactivatable diazido Pt(IV) anticancer prodrug, trans,trans,trans-[Pt(N3)2(OH)2(py)2], with a specific 15-mer oligodeoxynucleotide (ODN I).
- To identify the DNA binding sites and characterize the reaction products, including adducts and oxidative damage.
- To elucidate the photochemical reactivity and sequence-length-dependent behavior of the Pt(IV) prodrug.
Main Methods:
- Mass spectrometric methods, including tandem mass spectrometry (MS/MS), were employed to analyze the reaction products.
- Oligodeoxynucleotide (ODN I) was incubated with the Pt(IV) prodrug.
- Fragmentation analysis was used to determine binding sites and adduct structures.
Main Results:
- Up to penta-platinated ODN I adducts were identified, with mono- and di-platinated adducts showing the highest intensity.
- Tandem MS revealed T2, G8, T11, and T9 as primary binding sites, with no significant binding to cytosine.
- Significant oxidative damage to guanine (G8) was observed, forming 8-hydroxyguanine (8-OH-G), spiroiminodihydantoin (Sp), and FapyG.
- The study indicated substantial photo-reduction of the Pt(IV) prodrug to Pt(II) and sequence-length-dependent photochemical reactivity.
Conclusions:
- The Pt(IV) prodrug exhibits specific binding preferences within the oligodeoxynucleotide, primarily at thymine and guanine residues.
- Photodecomposition of the prodrug generates reactive oxygen species, leading to significant oxidative DNA damage.
- The findings highlight the sequence-length-dependent photochemical reactivity of this Pt(IV) prodrug, offering insights for designing targeted cancer therapies.
Related Concept Videos
Translesion DNA Polymerases
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
Nucleotide Excision Repair
Aryldiazonium Salts to Azo Dyes: Diazo Coupling
DNA Topoisomerases
Types and Mechanism of action
Topoisomerases are divided into two main types. ...

