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Updated: Dec 12, 2025

Characterizing Individual Protein Aggregates by Infrared Nanospectroscopy and Atomic Force Microscopy
Published on: September 12, 2019
Quantitative approach to study secondary structure of proteins by FT-IR spectroscopy, using a model wheat gluten
Mehtap Fevzioglu1, Oguz Kaan Ozturk2, Bruce R Hamaker2
1Agricultural and Biological Engineering, Purdue University, 225 South University Street, West Lafayette, IN 47907, USA; Whistler Carbohydrate Research Center, Purdue University, 745 Agricultural Mall Drive, West Lafayette, IN 47907, USA.
Abstract:
Amide I and Amide III vibrational modes are frequently used to study protein secondary structure with Fourier transform infrared (FT-IR) spectroscopy. However, for protein mixtures, neither the sole Amide I nor Amide III region provides sufficient information for structural quantitation because of overlapping peaks, especially in the Amide I region. Here, an improved quantitative approach is proposed to estimate secondary structure of protein systems using resolution enhancement and curve-fitting data processing techniques on a gluten model system to investigate structure-function relationships. Twelve different scenarios were prepared to assign bands in the Amide I region. Frequency ranges of 1660-1640 cm-1 and 1665-1660 cm-1 were found to highly contribute to variability in secondary structure contents of samples. Utilization of the Amide III region as a conducive tool to assign bands in the Amide I region led to a better differentiation of some secondary structural motifs and a more accurate quantitation of protein secondary structure. The study presents an understanding of FT-IR data analysis for a quick technique to assess secondary structures of protein mixtures.
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