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Updated: Dec 12, 2025

Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
Checkpoint adaptation in recombination-deficient cells drives aneuploidy and resistance to genotoxic agents
Olga Vydzhak1, Katharina Bender1, Julia Klermund2
1Institute of Molecular Biology (IMB), Mainz, 55128, Germany; Johannes Gutenberg University Mainz, Faculty of Biology, Institute of Developmental Biology and Neurobiology, Mainz, 55128, Germany.
Abstract:
Human cancers frequently harbour mutations in DNA repair genes, rendering the use of DNA damaging agents as an effective therapeutic intervention. As therapy-resistant cells often arise, it is important to better understand the molecular pathways that drive resistance in order to facilitate the eventual targeting of such processes. We employ recombination-defective diploid yeast as a model to demonstrate that, in response to genotoxic challenges, nearly all cells eventually undergo checkpoint adaptation, resulting in the generation of aneuploid cells with whole chromosome losses that have acquired resistance to the initial genotoxic challenge. We demonstrate that adaptation inhibition, either pharmacologically, or genetically, drastically reduces the occurrence of resistant cells. Additionally, the aneuploid phenotypes of the resistant cells can be specifically targeted to induce cytotoxicity. We provide evidence that TORC1 inhibition with rapamycin, in combination with DNA damaging agents, can prevent both checkpoint adaptation and the continued growth of aneuploid resistant cells.
Insights
Cancer cells can adapt to DNA damaging therapies by becoming aneuploid. Inhibiting this adaptation, using rapamycin and DNA damaging agents, prevents resistant cell growth and offers a new therapeutic strategy.
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- Human cancers often have DNA repair gene mutations, making DNA damaging agents a viable treatment.
- Therapy resistance is a significant challenge in cancer treatment, necessitating research into resistance mechanisms.
Purpose of the Study:
- To investigate the molecular pathways driving resistance to DNA damaging agents in cancer.
- To explore therapeutic strategies targeting resistance mechanisms.
Main Methods:
- Utilizing recombination-defective diploid yeast as a model system.
- Inducing genotoxic stress and observing cellular responses, including checkpoint adaptation and aneuploidy.
- Employing pharmacological and genetic inhibition of adaptation pathways.
- Investigating the efficacy of TORC1 inhibition with rapamycin in combination with DNA damaging agents.
Main Results:
- Genotoxic challenges induce checkpoint adaptation in nearly all yeast cells, leading to aneuploid cells with whole chromosome losses that are resistant to the initial challenge.
- Inhibiting adaptation, either pharmacologically or genetically, significantly reduces the generation of resistant cells.
- Aneuploid phenotypes of resistant cells can be specifically targeted to induce cytotoxicity.
- TORC1 inhibition with rapamycin, combined with DNA damaging agents, effectively prevents checkpoint adaptation and the proliferation of aneuploid resistant cells.
Conclusions:
- Checkpoint adaptation leading to aneuploidy is a key mechanism of resistance to DNA damaging agents.
- Targeting adaptation pathways, particularly through TORC1 inhibition, presents a promising strategy to overcome therapeutic resistance in cancer.
- Combined therapy of DNA damaging agents and rapamycin can prevent the emergence and growth of resistant cancer cells.
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