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Applying Advanced In Vitro Culturing Technology to Study the Human Gut Microbiota
Published on: February 15, 2019
Evolving Technologies in Gastrointestinal Microbiome Era and Their Potential Clinical Applications
Abraham Ajayi1, Tolulope Jolaiya2, Stella Smith1,3
1Department of Molecular Biology and Biotechnology, Nigerian Institute of Medical Research, Yaba, Lagos 101212, Nigeria.
Abstract:
The human gastrointestinal microbiota (GIM) is a complex and diverse ecosystem that consists of community of fungi, viruses, protists and majorly bacteria. The association of several human illnesses, such as inflammatory bowel disease, allergy, metabolic syndrome and cancers, have been linked directly or indirectly to compromise in the integrity of the GIM, for which some medical interventions have been proposed or attempted. This review highlights and gives update on various technologies, including microfluidics, high-through-put sequencing, metabolomics, metatranscriptomics and culture in GIM research and their applications in gastrointestinal microbiota therapy, with a view to raise interest in the evaluation, validation and eventual use of these technologies in diagnosis and the incorporation of therapies in routine clinical practice.
Insights
The human gastrointestinal microbiota (GIM) impacts health and disease. This review explores advanced technologies for GIM research and therapy, aiming for clinical integration.
Area of Science:
- Microbiology
- Gastroenterology
- Biotechnology
Background:
- The human gastrointestinal microbiota (GIM) is a complex ecosystem crucial for health.
- Disruptions in GIM integrity are linked to inflammatory bowel disease, allergies, metabolic syndrome, and cancers.
- Current medical interventions for GIM-related issues are limited.
Purpose of the Study:
- To review and update on technologies used in GIM research.
- To highlight the applications of these technologies in gastrointestinal microbiota therapy.
- To encourage the evaluation and clinical adoption of these advanced diagnostic and therapeutic tools.
Main Methods:
- Microfluidics
- High-throughput sequencing
- Metabolomics
- Metatranscriptomics
- Culture-based methods
Main Results:
- These technologies offer powerful tools for analyzing GIM composition and function.
- Applications range from basic research to the development of novel therapeutic strategies.
- Successful validation can lead to improved diagnosis and personalized GIM therapies.
Conclusions:
- Advanced technologies are revolutionizing GIM research.
- There is a need for validation and integration of these tools into clinical practice.
- This review aims to stimulate interest in leveraging these technologies for improved gastrointestinal health outcomes.
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