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Parametric survival analysis using R: Illustration with lung cancer data
Mukesh Kumar1, Prashant Kr Sonker1, Agni Saroj1
1Department of Statistics, M.M.V, Banaras Hindu University, Varanasi, India.
This study demonstrates parametric survival models as an alternative to Cox regression for lung cancer data analysis. The log-logistic model showed the best fit for African American lung cancer patients using R software.
Area of Science:
- Oncology
- Biostatistics
- Survival Analysis
Background:
- Cox regression is a prevalent survival model in oncology.
- Parametric survival models offer an alternative to Cox regression.
- This study applies semiparametric and various parametric models to lung cancer data.
Purpose of the Study:
- To illustrate the application of parametric survival models in lung cancer research.
- To compare the performance of different parametric models against Cox regression.
- To identify predictors of overall survival in African American lung cancer patients.
Main Methods:
- Utilized lung cancer data from 66 African American patients.
- Included patient stage, sex, age, smoking history, and tumor grade as predictors.
- Employed R software with the "Survival" package for analysis, comparing models using Akaike Information Criterion (AIC).
Main Results:
- Parametric models were fitted, controlling for age and stage.
- The log-logistic model exhibited the minimum AIC value (462.4087).
- The log-logistic model was determined to be the best fit for the studied African American lung cancer data.
Conclusions:
- Parametric survival models can be challenging to implement in routine cancer research.
- This paper provides a practical illustration of applying parametric survival models using R software.
- The study aims to facilitate the adoption of parametric survival models in clinical research.
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