Related Experiment Video
Updated: Dec 11, 2025

Sequence-specific and Selective Recognition of Double-stranded RNAs over Single-stranded RNAs by Chemically Modified Peptide Nucleic Acids
Published on: September 21, 2017
Antisense drug discovery and development technology considered in a pharmacological context
Stanley T Crooke1, Xue-Hai Liang1, Rosanne M Crooke1
1Ionis Pharmaceuticals, Inc., Carlsbad, CA, USA.
Antisense oligonucleotides (ASOs) and small interfering RNAs (siRNAs) are therapeutic nucleic acids with shared origins and distinct pharmacological properties. This review compares their mechanisms, delivery, and therapeutic potential.
Area of Science:
- Biochemistry
- Pharmacology
- Molecular Biology
Background:
- The terms "antisense" and "siRNA" historically described distinct oligonucleotide structures and mechanisms.
- Medicinal chemistry advancements for ASOs paved the way for siRNA technology, highlighting shared chemical foundations.
- Both ASOs and siRNAs are single-stranded or double-stranded oligonucleotides used therapeutically, targeting RNA for gene silencing.
Purpose of the Study:
- To place antisense oligonucleotides (ASOs) within a pharmacological context.
- To compare the pharmacological behavior of ASOs with that of small interfering RNAs (siRNAs).
- To elucidate the commonalities and differences between ASO and siRNA therapeutic approaches.
Main Methods:
- Review of existing literature on ASO and siRNA medicinal chemistry, pharmacology, and therapeutic applications.
- Comparative analysis of oligonucleotide structures, mechanisms of action, and pharmacokinetic properties.
- Examination of delivery routes and challenges associated with ASO and siRNA therapeutics.
Main Results:
- ASOs and siRNAs share common chemical foundations and can both engage Ago2 for RNA cleavage.
- Significant differences exist in their pharmacokinetic profiles, influencing potential delivery routes.
- ASOs offer diverse post-RNA binding mechanisms, whereas siRNAs rely exclusively on Ago2 activity.
Conclusions:
- ASOs and siRNAs, despite differences, are both crucial therapeutic nucleic acid modalities.
- Understanding their distinct pharmacological profiles is essential for optimizing their use in medicine.
- Further research into optimizing delivery and mechanisms for both ASOs and siRNAs will advance nucleic acid therapeutics.
Related Concept Videos
Drug Discovery: Overview
Structure-Activity Relationships and Drug Design
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...
siRNA - Small Interfering RNAs
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
Experimental RNAi
Principles of Drug Action
Drugs can be agonists or antagonists. Like the endogenous ligands, agonists always bind and activate the target to produce a cellular response. Agonist binding induces a conformational change which in turn...
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...

