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Updated: Dec 11, 2025

Comprehensive DNA Methylation Analysis Using a Methyl-CpG-binding Domain Capture-based Method in Chronic Lymphocytic Leukemia Patients
Published on: June 16, 2017
ITGA4 gene methylation status in chronic lymphocytic leukemia
Hanaa Rm Attia1, Mona Hamed Ibrahim1, Shereen H Abd El-Aziz1
1Clinical & Chemical Pathology Department, Medical Division, National Research Centre, Centre of Excellence, Cairo, Egypt.
Background:
We aimed to investigate ITGA4 gene expression pattern and to explore its methylation heterogeneity in chronic lymphocytic leukemia (CLL).
Patients & Methods:
Eighty one CLL patients and 75 healthy subjects were enrolled and prognostic evaluation of patients was assessed. ITGA4 q-realtime PCR was performed using Applied Biosystems, TaqMan gene expression assay. ITGA4 gene-specific CpG methylation was investigated in real time using pyrosequencing technology.
Results:
ITGA4 was differentially expressed in CLL patients. The CpG sites-1, 2 and 3 showed significantly higher mean levels than healthy controls (p = <0.001, 0.007 and 0.009). Significant association between CpG site-1 and CLL has been detected using age-adjusted logistic regression (p < 0.001).
Conclusion:
Hypermethylation at ITGA4 gene CpG sites (1,2,3) is a characteristic feature in CLL.
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