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Divergent evolution and purifying selection of the Type 2 diabetes gene sequences in Drosophila: a phylogenomic study
Manoj Kumar Gupta1, Ramakrishna Vadde2
1Department of Biotechnology & Bioinformatics, Yogi Vemana University, Kadapa, Andhra Pradesh, 516005, India.
Abstract:
The recently developed phylogenomic approach provides a unique way to identify disease risk or protective allele in any organism. While risk alleles evolve mostly under purifying selection, protective alleles are evolving either under balancing or positive selection. Owing to insufficient information, authors employed the phylogenomic approach to detect the nature of selection acting on type 2 diabetes (T2D) genes in Drosophila genus using various models of CODEML utility of PAML. The obtained result revealed that T2D gene sequences are evolving under purifying selection. However, only a few sites in membrane proteins encoded via CG8051, ZnT35C, and kar, are significantly evolving under positive selection under specific scenarios, which might be because of positive or adaptive evolution in response to changing niche, diet or other factors. In the near future, this information will be highly useful in the field of evolutionary medicine and the drug discovery process.
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