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Updated: Dec 11, 2025

Extraction of Histones from Clinical Specimens for Epigenetic Profiling by Mass Spectrometry
Published on: November 21, 2025
Histone modifications in epigenetic regulation of cancer: Perspectives and achieved progress
Margarita E Neganova1, Sergey G Klochkov1, Yulia R Aleksandrova1
1Institute of Physiologically Active Compounds Russian Academy of Sciences, 1, Severnii pr., Chernogolovka, 142432, Russian Federation.
Abstract:
Epigenetic changes associated with histone modifications play an important role in the emergence and maintenance of the phenotype of various cancer types. In contrast to direct mutations in the main DNA sequence, these changes are reversible, which makes the development of inhibitors of enzymes of post-translational histone modifications one of the most promising strategies for the creation of anticancer drugs. To date, a wide variety of histone modifications have been found that play an important role in the regulation of chromatin state, gene expression, and other nuclear events. This review examines the main features of the most common and studied epigenetic histone modifications with a proven role in the pathogenesis of a wide range of malignant neoplasms: acetylation / deacetylation and methylation / demethylation of histone proteins, as well as the role of enzymes of the HAT / HDAC and HMT / HDMT families in the development of oncological pathologies. The data on the relationship between histone modifications and certain types of cancer are presented and discussed. Special attention is devoted to the consideration of various strategies for the development of epigenetic inhibitors. The main directions of the development of inhibitors of histone modifications are analyzed and effective strategies for their creation are identified and discussed. The most promising strategy is the use of multitarget drugs, which will affect multiple molecular targets of cancer. A critical analysis of the current status of approved epigenetic anticancer drugs has also been performed.
Insights
Epigenetic histone modifications drive cancer phenotypes but are reversible. Inhibitors targeting histone-modifying enzymes, especially multitarget drugs, offer a promising anticancer strategy by reversing these epigenetic changes.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Epigenetic alterations, specifically histone modifications, are crucial in cancer development and maintenance.
- Unlike DNA mutations, these epigenetic changes are reversible, presenting therapeutic opportunities.
Purpose of the Study:
- To review key epigenetic histone modifications (acetylation/deacetylation, methylation/demethylation) and their role in cancer pathogenesis.
- To analyze the function of histone-modifying enzyme families (HAT/HDAC, HMT/HDMT) in oncological diseases.
- To discuss strategies for developing epigenetic inhibitors as anticancer therapeutics.
Main Methods:
- Literature review of epigenetic histone modifications and their involvement in various cancers.
- Analysis of enzyme families regulating histone modifications (HAT/HDAC, HMT/HDMT).
- Examination of current and emerging strategies for epigenetic inhibitor development.
Main Results:
- Histone acetylation/deacetylation and methylation/demethylation are significantly implicated in numerous cancers.
- Enzymes like HATs, HDACs, HMTs, and HDMTs are key players in cancer development.
- Multitargeting drugs that affect multiple molecular targets show the most promise for epigenetic cancer therapy.
Conclusions:
- Epigenetic histone modifications are critical, reversible drivers of cancer.
- Targeting histone-modifying enzymes offers a viable strategy for novel anticancer drug development.
- Multitarget epigenetic inhibitors represent a promising therapeutic direction for cancer treatment.
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