Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Equilibrium Conditions for a Particle01:23

Equilibrium Conditions for a Particle

2.0K
When an object is in equilibrium, it is either at rest or moving with a constant velocity. There are two types of equilibrium: static and dynamic. Static equilibrium occurs when an object is at rest, while dynamic equilibrium occurs when an object is moving with a constant velocity. In both cases, there must be a balance of forces acting on the object.
To understand the concept of equilibrium, let us first consider the forces acting on an object. When different forces act on an object, they can...
2.0K
First Law: Particles in One-dimensional Equilibrium01:10

First Law: Particles in One-dimensional Equilibrium

7.7K
Newton's first law of motion states that a body at rest remains at rest, or if in motion, remains in motion at constant velocity, unless acted on by a net external force. It also states that there must be a cause for any change in velocity (a change in either magnitude or direction) to occur. This cause is a net external force. For example, consider what happens to an object sliding along a rough horizontal surface. The object quickly grinds to a halt, due to the net force of friction. If...
7.7K
Oscillations about an Equilibrium Position01:04

Oscillations about an Equilibrium Position

6.4K
Stability is an important concept in oscillation. If an equilibrium point is stable, a slight disturbance of an object that is initially at the stable equilibrium point will cause the object to oscillate around that point. For an unstable equilibrium point, if the object is disturbed slightly, it will not return to the equilibrium point. There are three conditions for equilibrium points—stable, unstable, and half-stable. A half-stable equilibrium point is also unstable, but is named so...
6.4K
First Law: Particles in Two-dimensional Equilibrium01:18

First Law: Particles in Two-dimensional Equilibrium

13.1K
Recall that a particle in equilibrium is one for which the external forces are balanced. Static equilibrium involves objects at rest, and dynamic equilibrium involves objects in motion without acceleration; but it is important to remember that these conditions are relative. For instance, an object may be at rest when viewed from one frame of reference, but that same object would appear to be in motion when viewed by someone moving at a constant velocity.
Newton's first law tells us about...
13.1K
Stability of Equilibrium Configuration01:23

Stability of Equilibrium Configuration

684
Understanding the stability of equilibrium configurations is a fundamental part of mechanical engineering. In any system, there are three distinct types of equilibrium: stable, neutral, and unstable.
A stable equilibrium occurs when a system tends to return to its original position when given a small displacement, and the potential energy is at its minimum. An example of a stable equilibrium is when a cantilever beam is fixed at one end and a weight is attached to the other end. If the weight...
684
Phase Diagram01:19

Phase Diagram

6.8K
The phase of a given substance depends on the pressure and temperature. Thus, plots of pressure versus temperature showing the phase in each region provide considerable insights into the thermal properties of substances. Such plots are known as phase diagrams. For instance, in the phase diagram for water (Figure 1), the solid curve boundaries between the phases indicate phase transitions (i.e., temperatures and pressures at which the phases coexist).
6.8K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Taking Care of Complexity: A Pragmatic View on Computational Modeling in Catalysis and Materials Science.

Journal of chemical theory and computation·2026
Same author

Enzyme Reset: Water-Mediated Tautomerization Restores the Catalytic Asparagine in Protein <i>O</i>-Fucosyltransferase 1.

Journal of chemical information and modeling·2026
Same author

Ceci n'est pas un committor, yet it samples like one: Efficient sampling via approximated committor functions.

The Journal of chemical physics·2026
Same author

Exploring chemistry and catalysis by biasing skewed distributions via deep learning.

Nature communications·2026
Same author

Committors without Descriptors.

Journal of chemical theory and computation·2026
Same author

The role of fluctuations in the nucleation process.

Proceedings of the National Academy of Sciences of the United States of America·2026

Related Experiment Video

Updated: Dec 10, 2025

An Analog Macroscopic Technique for Studying Molecular Hydrodynamic Processes in Dense Gases and Liquids
11:03

An Analog Macroscopic Technique for Studying Molecular Hydrodynamic Processes in Dense Gases and Liquids

Published on: December 4, 2017

8.9K

Tautomeric Equilibrium in Condensed Phases.

Emanuele Grifoni1,2, GiovanniMaria Piccini1,2, Michele Parrinello1,2,3

  • 1Department of Chemistry and Applied Biosciences, ETH Zurich, c/o USI Campus, Via Giuseppe Buffi 13, CH-6900 Lugano, Ticino, Switzerland.

Journal of Chemical Theory and Computation
|August 29, 2020
PubMed
Summary

This study uses advanced molecular dynamics to explore how glycine and acetone change forms in water. The new method accurately models proton transfer, revealing complex dynamics even in simple molecules.

More Related Videos

Methods of Ex Situ and In Situ Investigations of Structural Transformations: The Case of Crystallization of Metallic Glasses
08:55

Methods of Ex Situ and In Situ Investigations of Structural Transformations: The Case of Crystallization of Metallic Glasses

Published on: June 7, 2018

8.8K
Thermochemical Studies of NiII and ZnII Ternary Complexes Using Ion Mobility-Mass Spectrometry
16:11

Thermochemical Studies of NiII and ZnII Ternary Complexes Using Ion Mobility-Mass Spectrometry

Published on: June 8, 2022

2.6K

Related Experiment Videos

Last Updated: Dec 10, 2025

An Analog Macroscopic Technique for Studying Molecular Hydrodynamic Processes in Dense Gases and Liquids
11:03

An Analog Macroscopic Technique for Studying Molecular Hydrodynamic Processes in Dense Gases and Liquids

Published on: December 4, 2017

8.9K
Methods of Ex Situ and In Situ Investigations of Structural Transformations: The Case of Crystallization of Metallic Glasses
08:55

Methods of Ex Situ and In Situ Investigations of Structural Transformations: The Case of Crystallization of Metallic Glasses

Published on: June 7, 2018

8.8K
Thermochemical Studies of NiII and ZnII Ternary Complexes Using Ion Mobility-Mass Spectrometry
16:11

Thermochemical Studies of NiII and ZnII Ternary Complexes Using Ion Mobility-Mass Spectrometry

Published on: June 8, 2022

2.6K

Area of Science:

  • Computational Chemistry
  • Physical Chemistry
  • Biophysical Chemistry

Background:

  • Tautomeric equilibrium is crucial for chemical and biological processes.
  • Proton transfer in aqueous solutions is complex due to water-ion interactions.
  • Standard enhanced sampling methods can struggle with proton dynamics in condensed systems.

Purpose of the Study:

  • To investigate tautomeric equilibrium in aqueous glycine and acetone using ab initio molecular dynamics.
  • To apply a novel collective variable (CV) approach for studying proton transfer reactions.
  • To demonstrate the method's ability to capture complex dynamics without prior assumptions.

Main Methods:

  • Ab initio molecular dynamics (MD) simulations.
  • Metadynamics for accelerated proton migration.
  • A recently developed set of collective variables (CVs) for proton transfer reactions.

Main Results:

  • Observed complex reaction pathways and non-trivial conversion dynamics for glycine and acetone in water.
  • Successfully modeled tautomeric interconversion without prior knowledge of dissociation pathways.
  • Validated the generality and applicability of the CV-based method for proton transfer.

Conclusions:

  • The developed CV approach is effective for studying tautomeric reactions in complex systems.
  • Even simple molecules like glycine and acetone exhibit intricate proton dynamics in water.
  • This method provides a robust tool for investigating proton dissociation and tautomerization.