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Published on: December 19, 2019
APOBEC3A catalyzes mutation and drives carcinogenesis in vivo
Emily K Law1,2,3,4, Rena Levin-Klein2,3,4, Matthew C Jarvis2,3,4
1Howard Hughes Medical Institute, University of Minnesota, Minneapolis, MN.
Abstract:
The APOBEC3 family of antiviral DNA cytosine deaminases is implicated as the second largest source of mutation in cancer. This mutational process may be a causal driver or inconsequential passenger to the overall tumor phenotype. We show that human APOBEC3A expression in murine colon and liver tissues increases tumorigenesis. All other APOBEC3 family members, including APOBEC3B, fail to promote liver tumor formation. Tumor DNA sequences from APOBEC3A-expressing animals display hallmark APOBEC signature mutations in TCA/T motifs. Bioinformatic comparisons of the observed APOBEC3A mutation signature in murine tumors, previously reported APOBEC3A and APOBEC3B mutation signatures in yeast, and reanalyzed APOBEC mutation signatures in human tumor datasets support cause-and-effect relationships for APOBEC3A-catalyzed deamination and mutagenesis in driving multiple human cancers.
Insights
The DNA deaminase APOBEC3A drives tumor formation in mice, unlike other family members. Its distinct mutation signature in tumors provides evidence for its role in causing human cancers.
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- The APOBEC3 family of DNA cytosine deaminases is a significant source of mutations in cancer.
- The precise role of individual APOBEC3 members in tumorigenesis remains unclear.
Purpose of the Study:
- To investigate the role of APOBEC3A in promoting cancer development.
- To determine if APOBEC3A-induced mutations are characteristic of human cancers.
Main Methods:
- Expression of human APOBEC3A in murine colon and liver tissues.
- Analysis of tumor DNA sequences for APOBEC signature mutations.
- Bioinformatic comparison of mutation signatures across species and datasets.
Main Results:
- APOBEC3A expression significantly increased tumorigenesis in murine models.
- APOBEC3B and other APOBEC3 members did not promote liver tumor formation.
- APOBEC3A-expressing tumors exhibited characteristic TCA/T motif mutations.
Conclusions:
- APOBEC3A acts as a driver of tumorigenesis.
- The APOBEC3A mutation signature in murine tumors mirrors signatures found in human cancers.
- APOBEC3A-catalyzed deamination is implicated in the development of multiple human cancers.
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