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Published on: July 27, 2021
Fanconi anemia-independent DNA inter-strand crosslink repair in eukaryotes
Cody M Rogers1, Robert H Simmons Iii1, Gabriella E Fluhler Thornburg1
1Molecular and Cellular Biochemistry Department, Indiana University, 212 S. Hawthorne Dr., Simon Hall MSB1 room 405B, Bloomington, IN, 47405, USA.
Abstract:
DNA inter-strand crosslinks (ICLs) are dangerous lesions that can be caused by a variety of endogenous and exogenous bifunctional compounds. Because covalently linking both strands of the double helix locally disrupts DNA replication and transcription, failure to remove even a single ICL can be fatal to the cell. Thus, multiple ICL repair pathways have evolved, with the best studied being the canonical Fanconi anemia (FA) pathway. However, recent research demonstrates that different types of ICLs (e.g., backbone distorting vs. non-distorting) can be discriminated by the cell, which then mounts a specific repair response using the FA pathway or one of a variety of FA-independent ICL repair pathways. This review focuses on the latter, covering current work on the transcription-coupled, base excision, acetaldehyde-induced, and SNM1A/RecQ4 ICL repair pathways and highlighting unanswered questions in the field. Answering these questions will provide mechanistic insight into the various pathways of ICL repair and enable ICL-inducing agents to be more effectively used as chemotherapeutics.
Insights
DNA inter-strand crosslinks (ICLs) are dangerous DNA lesions. This review explores Fanconi anemia-independent repair pathways, offering insights into ICL repair mechanisms and chemotherapeutic applications.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- DNA inter-strand crosslinks (ICLs) pose significant threats to DNA replication and transcription.
- The Fanconi anemia (FA) pathway is the primary known mechanism for ICL repair.
- Cells can distinguish between different ICL types, activating specific repair pathways.
Purpose of the Study:
- To review current research on Fanconi anemia-independent ICL repair pathways.
- To highlight key unanswered questions in the field of ICL repair.
- To explore the therapeutic potential of understanding ICL repair mechanisms.
Main Methods:
- Literature review of ICL repair mechanisms.
- Analysis of FA-independent pathways including transcription-coupled, base excision, acetaldehyde-induced, and SNM1A/RecQ4 pathways.
- Identification of knowledge gaps in ICL repair.
Main Results:
- Multiple FA-independent ICL repair pathways exist.
- These pathways are activated based on the specific type of ICL.
- Specific pathways reviewed include transcription-coupled, base excision, acetaldehyde-induced, and SNM1A/RecQ4.
Conclusions:
- Understanding diverse ICL repair pathways is crucial for cellular survival.
- Further research into these pathways will elucidate ICL repair mechanisms.
- This knowledge can enhance the efficacy of ICL-inducing chemotherapeutics.
Related Concept Videos
Homologous Recombination
Long-patch Base Excision Repair
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Fixing Double-strand Breaks
Restarting Stalled Replication Forks
Base-pairing and DNA Repair

