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Published on: August 11, 2017
Genomic Profiling Identifies Outcome-Relevant Mechanisms of Innate and Acquired Resistance to Third-Generation
Sebastian Michels1, Carina Heydt1, Bianca van Veggel2
1University Hospital of Cologne, Cologne, Germany.
Purpose:
Third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors (TKIs) are effective in acquired resistance (AR) to early-generation EGFR TKIs in EGFR-mutant lung cancer. However, efficacy is marked by interindividual heterogeneity. We present the molecular profiles of pretreatment and post-treatment samples from patients treated with third-generation EGFR TKIs and their impact on treatment outcomes.
Methods:
Using the databases of two lung cancer networks and two lung cancer centers, we molecularly characterized 124 patients with EGFR p.T790M-positive AR to early-generation EGFR TKIs. In 56 patients, correlative analyses of third-generation EGFR TKI treatment outcomes and molecular characteristics were feasible. In addition, matched post-treatment biopsy samples were collected for 29 patients with progression to third-generation EGFR TKIs.
Results:
Co-occurring genetic aberrations were found in 74.4% of EGFR p.T790-positive samples (n = 124). Mutations in TP53 were the most frequent aberrations detected (44.5%; n = 53) and had no significant impact on third-generation EGFR TKI treatment. Mesenchymal-epithelial transition factor (MET) amplifications were found in 5% of samples (n = 6) and reduced efficacy of third-generation EGFR TKIs significantly (eg, median progression-free survival, 1.0 months; 95% CI, 0.37 to 1.72 v 8.2 months; 95% CI, 1.69 to 14.77 months; P ≤ .001). Genetic changes in the 29 samples with AR to third-generation EGFR TKIs were found in EGFR (eg, p.T790M loss, acquisition of p.C797S or p.G724S) or in other genes (eg, MET amplification, KRAS mutations).
Conclusion:
Additional genetic aberrations are frequent in EGFR-mutant lung cancer and may mediate innate and AR to third-generation EGFR TKIs. MET amplification was strongly associated with primary treatment failure and was a common mechanism of AR to third-generation EGFR TKIs. Thus, combining EGFR inhibitors with TKIs targeting common mechanisms of resistance may delay AR.
Insights
Third-generation EGFR TKIs show variable efficacy in EGFR-mutant lung cancer. MET amplification significantly reduces efficacy and is a common resistance mechanism, suggesting combination therapies may improve outcomes.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors (TKIs) are a key treatment for EGFR-mutant lung cancer with acquired resistance (AR) to earlier TKIs.
- However, patient responses to these advanced TKIs exhibit significant interindividual variability.
Purpose of the Study:
- To investigate the molecular profiles of pretreatment and post-treatment samples from patients with EGFR-mutant lung cancer.
- To determine the impact of these molecular characteristics on treatment outcomes with third-generation EGFR TKIs.
Main Methods:
- Molecular characterization of 124 patients with EGFR p.T790M-positive AR to early-generation EGFR TKIs.
- Correlative analyses of treatment outcomes and molecular profiles in 56 patients.
- Analysis of post-treatment biopsy samples from 29 patients who progressed on third-generation EGFR TKIs.
Main Results:
- Co-occurring genetic aberrations were identified in 74.4% of EGFR p.T790M-positive samples.
- TP53 mutations were frequent (44.5%) but did not significantly impact treatment.
- MET amplification (5% of samples) was associated with significantly reduced efficacy (median PFS 1.0 months vs. 8.2 months).
- Mechanisms of acquired resistance to third-generation TKIs included EGFR alterations (e.g., p.T790M loss, p.C797S, p.G724S acquisition) and other gene changes (e.g., MET amplification, KRAS mutations).
Conclusions:
- Frequent additional genetic aberrations in EGFR-mutant lung cancer can mediate resistance to third-generation EGFR TKIs.
- MET amplification is strongly linked to primary treatment failure and is a common mechanism of acquired resistance.
- Combining EGFR inhibitors with TKIs targeting resistance mechanisms may help delay acquired resistance and improve patient outcomes.
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