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LSD1 represses a neonatal/reparative gene program in adult intestinal epithelium
Rosalie T Zwiggelaar1, Håvard T Lindholm1, Madeleine Fosslie2
1CEMIR-Centre of Molecular Inflammation Research, Department of Clinical and Molecular Medicine, NTNU-Norwegian University of Science and Technology, 7491 Trondheim, Norway.
Insights
Lysine-specific demethylase 1A (LSD1) is essential for Paneth cell development in the neonatal intestine. LSD1 inhibition enhances intestinal epithelial regeneration after injury, offering a potential therapeutic target.
Area of Science:
- Gastroenterology
- Developmental Biology
- Epigenetics
Background:
- Intestinal epithelial homeostasis relies on adult stem cells and Paneth cells, which emerge postnatally.
- Neonatal intestinal development requires precise regulation of epithelial cell differentiation.
Purpose of the Study:
- To identify epigenetic regulators of neonatal intestinal epithelial development.
- To investigate the role of lysine-specific demethylase 1A (KDM1A/LSD1) in Paneth cell differentiation.
Main Methods:
- Utilized Paneth cell-skewed organoid cultures with epigenetic modifier inhibitors.
- Tested Lsd1-deficient crypts for organoid formation and regenerative capacity.
- Analyzed gene expression profiles in Lsd1-deficient epithelium.
Main Results:
- Lysine-specific demethylase 1A (LSD1) is crucial for Paneth cell differentiation.
- LSD1 deficiency allows Wnt-independent organoid formation and represses fetal/neonatal gene expression.
- LSD1-deficient epithelium exhibits enhanced regenerative capacity after irradiation injury.
Conclusions:
- LSD1 is a key regulator of neonatal intestinal development.
- Targeting LSD1 can reprogram intestinal epithelium towards a reparative state, suggesting therapeutic potential for regenerative medicine.
Abstract:
Intestinal epithelial homeostasis is maintained by adult intestinal stem cells, which, alongside Paneth cells, appear after birth in the neonatal period. We aimed to identify regulators of neonatal intestinal epithelial development by testing a small library of epigenetic modifier inhibitors in Paneth cell-skewed organoid cultures. We found that lysine-specific demethylase 1A (Kdm1a/Lsd1) is absolutely required for Paneth cell differentiation. Lsd1-deficient crypts, devoid of Paneth cells, are still able to form organoids without a requirement of exogenous or endogenous Wnt. Mechanistically, we find that LSD1 enzymatically represses genes that are normally expressed only in fetal and neonatal epithelium. This gene profile is similar to what is seen in repairing epithelium, and we find that Lsd1-deficient epithelium has superior regenerative capacities after irradiation injury. In summary, we found an important regulator of neonatal intestinal development and identified a druggable target to reprogram intestinal epithelium toward a reparative state.
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