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Pharmacophore Modeling for Targets with Extensive Ligand Libraries: A Case Study on SARS-CoV-2 Mpro
Published on: September 26, 2025
A Review on Novel Drug Targets and Future Directions for COVID-19 Treatment
Yohannes Tsegyie Wondmkun1, Ousman Ahmed Mohammed2
1Department of Pharmacology and Clinical Pharmacy, School of Pharmacy, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia.
Abstract:
Severe acute respiratory syndrome coronavirus-2 causes coronavirus disease-19 (COVID-19) that spreads quickly in the world. Considering the impact of this pandemic, researchers have been racing to understand the peculiar nature of the virus and the pathogenesis of the disease to uncover possible drug targets, effective therapeutic agents, and vaccines. Accordingly, numerous drug targets are identified by scientists. Among them, structural glycoproteins, virulence factors, host-specific receptors and enzymes, non-structure proteins, the Janus kinase/signal transducers and activators of transcription (JAK/STAT) signaling pathway, and pro-inflammatory cytokines are discussed herein. This review summarizes the promising drug targets for COVID-19, and highlights antiviral strategies which depend on molecular interactions between viral small molecules and host biologic machinery for repurposing the available clinical drugs. In addition, it gives a strong rational basis for the ongoing discovery of new drugs and vaccines.
Insights
This review identifies key drug targets for COVID-19, including viral proteins and host pathways like JAK/STAT. It highlights antiviral strategies and drug repurposing for developing new treatments and vaccines against SARS-CoV-2.
Area of Science:
- Virology
- Immunology
- Pharmacology
Background:
- Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) causes a global pandemic, necessitating rapid understanding of its mechanisms.
- Research efforts focus on identifying viral characteristics and disease pathogenesis to discover therapeutic interventions and vaccines.
- Numerous potential drug targets have been proposed by scientists to combat the virus.
Purpose of the Study:
- To review and summarize promising drug targets for COVID-19.
- To highlight antiviral strategies involving molecular interactions for drug repurposing.
- To provide a rational basis for the discovery of novel drugs and vaccines.
Main Methods:
- Literature review of identified drug targets for SARS-CoV-2.
- Analysis of antiviral strategies based on molecular interactions.
- Examination of host-specific factors and viral components as therapeutic targets.
Main Results:
- Identified drug targets include structural glycoproteins, virulence factors, host receptors/enzymes, non-structure proteins, the JAK/STAT pathway, and pro-inflammatory cytokines.
- Antiviral strategies focus on repurposing existing drugs through molecular interactions with viral and host machinery.
- The review provides a foundation for ongoing drug and vaccine development.
Conclusions:
- Several key targets and strategies show promise for COVID-19 treatment and prevention.
- Drug repurposing offers a viable approach to rapidly address the pandemic.
- Continued research into molecular targets is crucial for developing effective new therapies and vaccines.
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