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Weakly Supervised Histopathology Image Segmentation With Sparse Point Annotations.

Zhe Chen, Zhao Chen, Jingxin Liu

    IEEE Journal of Biomedical and Health Informatics
    |September 15, 2020
    PubMed
    Summary
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    Weakly supervised learning (WSL) models can now accurately segment digital histopathology images for cancer diagnostics. Our novel WESUP framework uses sparse point annotations to achieve this, even outperforming fully supervised methods.

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    Area of Science:

    • Digital pathology
    • Computer-assisted diagnostics
    • Machine learning for medical imaging

    Background:

    • Digital histopathology image segmentation aids cancer diagnostics.
    • Manual annotations are difficult, making weak supervision preferable.
    • Existing weakly supervised models struggle with histopathology image heterogeneity.

    Purpose of the Study:

    • Introduce WESUP, a novel end-to-end weakly supervised learning framework.
    • Achieve accurate segmentation and generalizability using sparse point annotations.
    • Address limitations of current weakly supervised methods in histopathology.

    Main Methods:

    • Employ hierarchical feature representation using superpixels for local and global context.
    • Utilize deep dynamic label propagation to identify targets from sparse annotations.
    • Jointly train both components and use pixel-wise inference for enhanced prediction.

    Main Results:

    • WESUP effectively distinguishes histological foreground from background.
    • Outperforms state-of-the-art weakly supervised methods on diverse histopathology datasets.
    • Achieves superior performance compared to fully supervised networks with minimal annotations.

    Conclusions:

    • WESUP offers a powerful solution for weakly supervised histopathology image segmentation.
    • Demonstrates the potential of minimal annotation strategies in medical imaging.
    • Advances computer-assisted cancer diagnostics through improved segmentation accuracy.