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Published on: January 26, 2016
Medical, Genomic, and Evolutionary Aspects of the Peptide Sharing between Pathogens, Primates, and Humans
Darja Kanduc1, Yehuda Shoenfeld2,3
1Department of Biosciences, Biotechnologies, and Biopharmaceutics, University of Bari, Bari, Italy.
Abstract:
Comparing mammalian proteomes for molecular mimicry with infectious pathogens highlights the highest levels of heptapeptide sharing between pathogens and human, murine, and rat proteomes, while the peptide sharing level is minimal (or absent) with proteomes from nonhuman primates such as gorilla, chimpanzee, and rhesus macaque. From the medical point of view, the data might be useful to clinicians and vaccinologists to develop and evaluate immunomodulatory and immunotherapeutic approaches. As a matter of fact, primates seem to be unreliable animal models for revealing potential autoimmune events in preclinical testing of immunotherapies. In terms of genomics, the scarce or absent peptide sharing between pathogens and primates versus the massive peptide sharing existing between pathogens and humans lets foresee mechanisms of pathogen sequence insertion/deletion/alteration that have differently operated in mammals over evolutionary timescales. Why and how the human genome has been colonized by pathogen sequences and why and how primates escaped such a colonization appears to be the new scientific challenge in our efforts to understand not only the origin of Homo sapiens but also his autoimmune diseasome.
Insights
Pathogens share more peptides with humans than primates, suggesting primates are unreliable models for immunotherapy testing. This finding offers insights into human evolution and autoimmune disease origins.
Area of Science:
- Genomics
- Immunology
- Evolutionary Biology
Background:
- Molecular mimicry between pathogens and host proteomes can trigger autoimmune responses.
- Understanding these interactions is crucial for developing effective immunotherapies and vaccines.
Purpose of the Study:
- To compare peptide sharing between infectious pathogens and various mammalian proteomes.
- To assess the reliability of nonhuman primates as animal models for preclinical immunotherapy testing.
Main Methods:
- Comparative analysis of heptapeptide sharing across mammalian and pathogen proteomes.
- Evaluation of peptide sharing levels between pathogens and human, murine, rat, and nonhuman primate proteomes.
Main Results:
- Highest heptapeptide sharing observed between pathogens and human, murine, and rat proteomes.
- Minimal to absent peptide sharing between pathogens and nonhuman primate proteomes (gorilla, chimpanzee, rhesus macaque).
Conclusions:
- Nonhuman primates may be unreliable models for predicting autoimmune events in immunotherapy preclinical testing.
- Disparate peptide sharing suggests differing evolutionary mechanisms of pathogen sequence integration in mammals.
- Investigating why humans acquired pathogen sequences while primates did not is key to understanding human origins and autoimmune diseases.
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